Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1499g00002 ATGATGAACCTCCTCATCCTCTTCTTCACCGTTCTTCTCTCTTTCCCCCTTCTTTCCCTCTCCGCAAACACCACCGCTTCAACCGCCCCTTGCCCTCTCAACTTCACCGTCCTCAGCGTCCTCAGCGGCGGCTCAAAACCCTCCTCCTTCGACTCCTCCGGCGGCAGCACTCGGTGCCAGTTCATCAACCAAGCGCTCCGTCTTGTTGATTCCGATTACCTTCGCCGAAGTGGGTTCTTCCTCCCTCCGTCGAACTCCTCCGAGTCATGCTGGAAAGACTTTCAATCTTACATCAACAAGTTCGACCCAAGCTTCGATATTCGTTCCTCGTGTGGATTACAAACAAGTTGGATCTCTGAGGGTTGCATCAACATCACCACAAAGCAACAATTCGAAGCCTCTGTTCCTCAATCATCGCTTCAAAATATGCAGGCAAATTGTAACCAATCTCTTGAGAATAACTCCCCTTGTGCTCTCTGCACCACAAGCTTGTCTAGTTTACCAGCTTTGGGACAATCCATTGGGAACCTTTCTGATTGCACGGGTTATCCTTCCGTTTATGCTGCTGCTTTCTCTAACCAGTTTGGGCCCACTGACCCTGGCACTGCAAAGTGTTTGTTCTCCCTTGATTTTACCTCTGGGGGTTCCTCTGGTGGCAAAAAGAAGGTTGTTATTGTGGTTGTCTCCATTGTTTGTGTCTTGGTTTTTTCATCCATAGTTCTTGGTTTTTGGGCTTATTGGAAATTGAATTACAAGATGAAAGGGGATGATAATGTTAATATTGCAGAGAGGGGTTTGGTTTCAGGGTTGGATTCGATGGACCAGAGTACTACTCTGATGAGGTTCACGATTGATGATGTTAAGAAGGCAACTAAGAACTTCTCAAGGGATAATATAATTGGGAGAGGGGGTTATGGGAATGTGTATAAAGGGTTACTGTCTGATGGGAGTGAAGTTGCGTTGAAGAGGTTCAAGAATGTTTCGGCTGCTGGTGATGCTAGCTTCACTCATGAAGTTGAGGTTATTGCGAGTGTTAGGCATGTGAACCTTGTTGCTTTGAGGGGTTATTGTTCTGCAACGACTCATTTAGAAGGTTACCAGAGGATTATTGTTTGTGATTTGATGAAAAATGGGAGTCTTCATGATCATTTGTTTGGTTCAATTGGGGATAAACTCAGTTGGCCAATCCGTCAGCAGATTGCTCTAGGAACGGCTAGGGGATTGGCTTATTTGCATTATGGGGCTCAGCCTTCCATCATTCATAGGGATATTAAAGCAAGCAATATACTTTTGGATGAGAGGTTTGAAGCTAAGGTAGCAGATTTTGGACTAGCAAAGTTCAACCCAGAGGGAATGACACATATGAGCACAAGGGTAGCTGGAACTATGGGGTATGTTGCTCCGGAGTATGCTTTGTATGGACAATTGACAGAGAGAAGTGATGTGTTCAGTTTTGGTGTTGTGCTTCTTGAGCTCTTGAGTGGGAGGAAGGCTCTTCAAATGAACAATGATGGTCAACCCTCTGCTTTGACTGATTGGGCTTGGTCATTAGTTAGAACAGTTATATGCTAG 1572 0.4542 MMNLLILFFTVLLSFPLLSLSANTTASTAPCPLNFTVLSVLSGGSKPSSFDSSGGSTRCQFINQALRLVDSDYLRRSGFFLPPSNSSESCWKDFQSYINKFDPSFDIRSSCGLQTSWISEGCINITTKQQFEASVPQSSLQNMQANCNQSLENNSPCALCTTSLSSLPALGQSIGNLSDCTGYPSVYAAAFSNQFGPTDPGTAKCLFSLDFTSGGSSGGKKKVVIVVVSIVCVLVFSSIVLGFWAYWKLNYKMKGDDNVNIAERGLVSGLDSMDQSTTLMRFTIDDVKKATKNFSRDNIIGRGGYGNVYKGLLSDGSEVALKRFKNVSAAGDASFTHEVEVIASVRHVNLVALRGYCSATTHLEGYQRIIVCDLMKNGSLHDHLFGSIGDKLSWPIRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTVIC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1499g00002 523 Gene3D Transferase(Phosphotransferase) domain 1 375 521 - -
Gabi1499g00002 523 SUPERFAMILY Protein kinase-like (PK-like) 270 505 IPR011009 -
Gabi1499g00002 523 Pfam SPARK 26 171 IPR043891 -
Gabi1499g00002 523 ProSiteProfiles Protein kinase domain profile. 294 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1499g00002 523 SMART serkin_6 294 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1499g00002 523 Gene3D Phosphorylase Kinase; domain 1 264 373 - -
Gabi1499g00002 523 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 375 522 - -
Gabi1499g00002 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Gabi1499g00002 523 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 126 518 - -
Gabi1499g00002 523 Pfam Protein kinase domain 295 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1499g00002 523 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Gabi1499g00002 523 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 256 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1499g00002 Gabi-Chr1499 29110 31198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1499g00002 4 519 Receptor kinase-like Gene Family AT2G48010 62.261 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gabi1499g00002 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1499g00002 - - gmx:100800760 766.148