Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1488g00013 ATGTTTGCAGAGACTGGTCTTTTCTTCCCATATTTGCAGAATTTCTCTCAGGAGATTCAACAACTTGATGAGTACTGCATGATCCAAAAGTCCAATGCTTCAATGATTGACCTTGTTCAATCTTCTGCAATGTCAGAATTTGATTTGTTAGTAGAGGGAGATTTGTTCAAAGCACCTGAACCTATCATTCAAGAACCATCAGTGGATCTCGATCCCATGCAAGCAGCCATGTCAATGATATCTTGTGGGGAAGACGTATCCTCACAGGGTCTAAAATCCTCAGATATTGATGTACTTCAAAATGAACAGCTTCTGAGTGATGTATTCTATGAGTGCAAAAAGGATCTCTTAGAAAAGGTAGCGTTAGAGTCACCACTCTCTGATATTCTGGAAATCAAGATTCCTACTCTGAACATAGATGAAATTTTAGTTCAAGAAAACAAACCACTTGCTGATGTGCCGCTACCGAAGAGTGTCAGTTCTGGAAGTTTGAGTTCAATGGACTGGATGTATGGAGCTGCAATGAAACCTGCTTTCCTTGATTTCCCTGGAATAGATTTCAATGCAGTTAATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTGGTAGTGGTAACATGAATGTTGGCCAATCTCCCCTTGAGAGGAATTCTCTTCTCAGCAACTGCACTAGCGAGGAACGTCGAGAAAAGCTCTCAAGATATAGGAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATACGTGGAAGATTTGCAAAGACGGAAGAGTTTGATGTCAAAAGGCAATGA 846 0.4078 MFAETGLFFPYLQNFSQEIQQLDEYCMIQKSNASMIDLVQSSAMSEFDLLVEGDLFKAPEPIIQEPSVDLDPMQAAMSMISCGEDVSSQGLKSSDIDVLQNEQLLSDVFYECKKDLLEKVALESPLSDILEIKIPTLNIDEILVQENKPLADVPLPKSVSSGSLSSMDWMYGAAMKPAFLDFPGIDFNAVNGMRRAFSEGDIKTLGSGNMNVGQSPLERNSLLSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDVKRQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1488g00013 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Gabi1488g00013 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 161 273 IPR045281 GO:0009909
Gabi1488g00013 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1488g00013 Gabi-Chr1488 148590 153258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1488g00013 206 275 C2C2-CO-like Transcription Factor Family AT5G57660 40.278 9.00e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1488g00013 CCT 7.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1488g00013 - - aprc:113853022 446.817