Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1483g00002 ATGGCTTCACCTAGTGGAGCTTATTCACCTGGTTCAAGCTCTCTTCAAAACTCTGCATCTGGTTCTGATGGAGACATGCAGCAACAGCATATCATGGATCAAAGGAAAAGGAAGAGAATGCTGTCCAATAGAGAATCAGCACGTAGATCAAGGATGAAGAAACAGCAACACCTGGATGGTCTTATTGCTATAGCGGATCAGCTTAAGAATGATAATAACCAAATCAACAATAGCATAGGCATCACCACACAGTTGTACCTGAACGTTGAAGCTGAGAATGAAATTCTCAGGACTCAGATGGCAGAACTAAGCAACAGGTTGCAGTCTCTCAATGAAATCATTGGTTACATAAACTCAAGCAGTTACCTCTTTGATGAATCTCAGGAGACTCATTTCAATGATTGTGGTGGCTTCATGGACACATGGAACTCTCTATCTCCTCTCAATCAACCAATCATGGCCTCTGTTGACATGTTGATGTATTGA 486 0.4177 MASPSGAYSPGSSSLQNSASGSDGDMQQQHIMDQRKRKRMLSNRESARRSRMKKQQHLDGLIAIADQLKNDNNQINNSIGITTQLYLNVEAENEILRTQMAELSNRLQSLNEIIGYINSSSYLFDESQETHFNDCGGFMDTWNSLSPLNQPIMASVDMLMY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1483g00002 161 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Gabi1483g00002 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 79 IPR004827 GO:0003700|GO:0006355
Gabi1483g00002 161 FunFam BZIP transcription factor 33 84 - -
Gabi1483g00002 161 SUPERFAMILY Leucine zipper domain 35 86 IPR046347 GO:0003700|GO:0006355
Gabi1483g00002 161 Gene3D - 33 114 - -
Gabi1483g00002 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 157 - -
Gabi1483g00002 161 Pfam bZIP transcription factor 35 80 IPR004827 GO:0003700|GO:0006355
Gabi1483g00002 161 MobiDBLite consensus disorder prediction 1 56 - -
Gabi1483g00002 161 Coils Coil 86 113 - -
Gabi1483g00002 161 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Gabi1483g00002 161 MobiDBLite consensus disorder prediction 1 28 - -
Gabi1483g00002 161 MobiDBLite consensus disorder prediction 29 56 - -
Gabi1483g00002 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1483g00002 Gabi-Chr1483 19621 20926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1483g00002 28 161 bZIP Transcription Factor Family AT4G34590 51.429 3.46e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1483g00002 bZIP_1 7.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1483g00002 K25786 - gmx:778139 179.874