Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1479g00006 ATGAAGAACATTTCCGCAACTTTTCTCTTACTCCTCCTCCTCCTTCCCTTGGCGTCATGCACAAAAAAGAAGCAGATTTACATAGTTGAGTTTGGAGCGCACACTAGTGGAGATAAAACTCTGCATGAAATAGAGAATACCCATCACTCTTATTTGCTTTCGTTGAAAGAAACTGAGGAGGAAGCCCGAGCTTCCTTTCTTTATAGTTACAAACACAGTATCAATGGCTTTGCAGCGTTGCTTACCCCAAAAGAAGCCAATAAGCTCTCAGAGATGGAGGGGGTGGTCTCTGTGCATAAGAGCAAGCCAAGGATCTACTCTATGCACACCACAAGGTCATGGAAGTTCGTGGGATTAGAAGGGGTTTTAAATCCTTGGGCAGAAGAATCCAATCAGACAAATGAAGACTTGTTAACCAGAGCCAAATATGGTGAAGACATCATAGTAGGAATGATTGACAGTGGTGTGTGGCCAGAGTCAAGGAGCTTCAGTGATGAAGGGATGGGACCTGTTCCACAAAATTGGACAGGAGTGTGCCAAAATGGAACTGCTTTCGATTCATCTAAATGTAATAGAAAAATTATTGGAGCTCGGTACTACTTGCAAGGTTATGAAAGTGCATTTGGCCGTCTAAACGAAAAGGAGGATTACAAATCAGCTCGTGACAAAGATGGACATGGAACTCATACAGCTTCTATAGTTGCAGGCCGTGCAGTTCCAAATGCCTCAGCCCTTGGAGGCTACGCCAAAGGCACTGCCTCAGGAGGAGCCCCCTTAGCACGCCTTGCCATATACAAAGCATGTTGGCCAATTAAAGGTAAATCAAAAGATGAAGGGAACGTATGCATGGACATTGATCTTCTCAAAGCTATAGATGATGCCATTGGTGATGGTGTTGATGTTTTAAGCATTTCCATTGGGTTCAAGATGCCACTCTCTTATGAGGAAGATGTGATTGCTATAGGAGCATTACATGCTTTAAAGAAGAACATTGTTGTGGTTTGTAGTGCGGGGAACTCTGGTCCTTTTCCTCAAAGTTTGTCAAACCCTGCCCCATGGATCATCACTGTTGGTGCTAGTACTGTGGACCGTTCCTTTCTTGCTCCAATTAAGCTAACCAATGGCACAATTATTGAGGGTCGATCAATTACTCCACTCCCCAGCAAAAACAGCTTCCACCCGCTGGTTCTCGCTGGAGATGTTGAACATCAAGGCGTGCTTCGTACAAATTCTGGGTATTGCCTGGAGAATACTCTTGAACCTAACAAAGTGAAGGGGAAGATAGTTGTTTGCATGAGAGGGCAAGGGGGGAGATTACTAAAAGGCCTAGAAGTTCAAAGGGCTGGTGGTGTTGGTTTTATCCTTGGGAACAATAAAACATATGGAAATGATGTACCATGTGATCCTCATTTCATTCCAGCCACTGGGGTGTCCTATGAGAATGTCTTGAAACTTGTTCAGTATATCCATTCCTCTCCTAATCCAATGGCACAATTTCTACCAGGAAGAACAGTTTTAGAAACCAAACCAGCACCCTCCATGGCCTCCTTCTCTAGCAGGGGTCCAAATATAATTGACCCTAATATCCTGAAGCCCGACATCACAGCTCCAGGATTAGACATATTGGCAGCATGGACTGCAGAAGATGGCCCTACAAGAATGACTTTTCACGATAAACGAGTTGTTAAGTACAACATCTTTTCTGGAACTTCAATGTCTTGCCCTCATGTTTCTGCAGCAGCAATTCTTATCAAAGCCATACACCCTACTTGGAGCAGTGCTGCTATAAGATCTGCCCTCGTAACCACAGCCAGGATAACAGACAACACGGGCAATCCACTGACTGATGAAACTGGAAATCGTGCAACGCCTTTTGCAATGGGTTCTGGCCACTTGTGCCCTGTAAGAGCAGCAGATCCTGGACTCATTTATGATGCCTCCTACATGGACTACCTTCTTTACACTTGTAGCCTTGGAGTAACTGCTCAAAACTTGAATGTTACATATAACTGCACAAAGTCATTTCCTGAACAGTTCGATCTTAACTATCCATCCATACAAGTCCATAGACTCAATGACACTAGGACTATTAAGAGGGCAGTCACCAATGTTGACAGGAGCAGGAGTGTTTACAAGTTTATTGCTAAGCCACCAAAGGAATTCTCCATTACAGCCACTCCAAACATTCTGAAATTTAATCATGTTGGGCAGAAAATGAACTTCATCATCACAGTGACAGCAAACAGAGGTCAGATACCAACCAAGTCTGACCCAGATAAGTACTATTTTGGATGGTATGCTTGGACTCACCAACATCACGTTGTAAGAAGCCCAGTAGCAGTGTCTTTTCTATAA 2355 0.4382 MKNISATFLLLLLLLPLASCTKKKQIYIVEFGAHTSGDKTLHEIENTHHSYLLSLKETEEEARASFLYSYKHSINGFAALLTPKEANKLSEMEGVVSVHKSKPRIYSMHTTRSWKFVGLEGVLNPWAEESNQTNEDLLTRAKYGEDIIVGMIDSGVWPESRSFSDEGMGPVPQNWTGVCQNGTAFDSSKCNRKIIGARYYLQGYESAFGRLNEKEDYKSARDKDGHGTHTASIVAGRAVPNASALGGYAKGTASGGAPLARLAIYKACWPIKGKSKDEGNVCMDIDLLKAIDDAIGDGVDVLSISIGFKMPLSYEEDVIAIGALHALKKNIVVVCSAGNSGPFPQSLSNPAPWIITVGASTVDRSFLAPIKLTNGTIIEGRSITPLPSKNSFHPLVLAGDVEHQGVLRTNSGYCLENTLEPNKVKGKIVVCMRGQGGRLLKGLEVQRAGGVGFILGNNKTYGNDVPCDPHFIPATGVSYENVLKLVQYIHSSPNPMAQFLPGRTVLETKPAPSMASFSSRGPNIIDPNILKPDITAPGLDILAAWTAEDGPTRMTFHDKRVVKYNIFSGTSMSCPHVSAAAILIKAIHPTWSSAAIRSALVTTARITDNTGNPLTDETGNRATPFAMGSGHLCPVRAADPGLIYDASYMDYLLYTCSLGVTAQNLNVTYNCTKSFPEQFDLNYPSIQVHRLNDTRTIKRAVTNVDRSRSVYKFIAKPPKEFSITATPNILKFNHVGQKMNFIITVTANRGQIPTKSDPDKYYFGWYAWTHQHHVVRSPVAVSFL 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1479g00006 784 Gene3D - 363 506 - -
Gabi1479g00006 784 FunFam Subtilisin-like protease SBT1.5 146 372 - -
Gabi1479g00006 784 Pfam PA domain 406 485 IPR003137 -
Gabi1479g00006 784 FunFam subtilisin-like protease SBT1.5 363 506 - -
Gabi1479g00006 784 Pfam Subtilase family 144 615 IPR000209 GO:0006508|GO:0008236
Gabi1479g00006 784 Pfam Fibronectin type-III domain 680 781 IPR041469 -
Gabi1479g00006 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 569 579 IPR023828 -
Gabi1479g00006 784 Pfam Peptidase inhibitor I9 27 103 IPR010259 -
Gabi1479g00006 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 781 IPR045051 -
Gabi1479g00006 784 Gene3D - 655 783 - -
Gabi1479g00006 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 109 IPR037045 -
Gabi1479g00006 784 Gene3D Peptidase S8/S53 domain 146 651 IPR036852 GO:0004252|GO:0006508
Gabi1479g00006 784 ProSiteProfiles Serine proteases, subtilase domain profile. 125 639 - -
Gabi1479g00006 784 CDD PA_subtilisin_like 370 497 - -
Gabi1479g00006 784 CDD Peptidases_S8_3 106 604 IPR034197 -
Gabi1479g00006 784 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Gabi1479g00006 784 PRINTS Subtilisin serine protease family (S8) signature 568 584 IPR015500 -
Gabi1479g00006 784 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Gabi1479g00006 784 SUPERFAMILY PA domain 391 500 IPR046450 -
Gabi1479g00006 784 SUPERFAMILY Subtilisin-like 134 639 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1479g00006 Gabi-Chr1479 78866 90903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1479g00006 1 783 Subtilisin-like Serine Gene Family AT5G45650 56.478 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1479g00006 - - gmx:100793064 1313.9