Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1476g00008 ATGAGTTTTCTTTTCCCTGAAAGTGTCTCAGCAAAGAAGAAGAAGCTCATCAGAGAGCTCCTTCAGGGACAGGAATATGCTACTAAGCTCAAGCTTTTGCTTCAGGAGCATGTTGGGGCTGATGGGTCTCTCTCAGCTAAGGAACTCGTTGCCAATGTGCTGAGATCTTTTGCTGAGACTCTTTCTGTTATGACTTGTTCTGAAGATGAGGTTGCTGATCAGAATCTTGTAAATTCCGGCGAAGATGGGTCCCAGGTGGCAGCTTCCACCAATGATCTGAGGTCTGAAGTTTCAACTGAGAGTAGGAAGAGATCTTTTCCGGCCACAAAGGATCGGAGAGGTTCCTACAAAAGAAGGAAGACTGAACTGACAAGGACCGTTGTTTCCCAAACTACCGATGATGAACATGCATGGAGAAAGTACGGACAGAAGGATATCCTGAATTGTAAATTCCCCAGGAGTTACTTCAGGTGCACTCGGAAGTATGATCAATGTTGCCGTGCAACCAAACAGGTGCAACGAATCCAAGATAATCCGGATATGTACCAAATTACGTACATTGACTTTCACACATGCAAAGACACCCTCAAGCCTCCACAAATGGTCACATATTCTGATACATTGGACTCATTTCTTGTGAATGGGTCCCATCCTGATTCAAAGGTGCCAAATGAACAGGATCCCCCTATTAGCTCACAAGACCCAACTATAATAAAAGAACATCCCAAACAAGAGACTCCGAGTGATCTTACAGACAACTTGGATCCTACCTTGTGGTCTGATTTGAAGGATTTTGAACTATCCAAGCCTGCCACTATACCCTTAAAGATGGCATCTGACAATGCAGATACTGTGTATTCATGTACTGGCTCTCAAAGTCTGGACTTGGATTTTGGGGTATTTTCATCTCATTTCGGCATCCACTTTGATGAAAGTAATTTGCTTTAG 948 0.4367 MSFLFPESVSAKKKKLIRELLQGQEYATKLKLLLQEHVGADGSLSAKELVANVLRSFAETLSVMTCSEDEVADQNLVNSGEDGSQVAASTNDLRSEVSTESRKRSFPATKDRRGSYKRRKTELTRTVVSQTTDDEHAWRKYGQKDILNCKFPRSYFRCTRKYDQCCRATKQVQRIQDNPDMYQITYIDFHTCKDTLKPPQMVTYSDTLDSFLVNGSHPDSKVPNEQDPPISSQDPTIIKEHPKQETPSDLTDNLDPTLWSDLKDFELSKPATIPLKMASDNADTVYSCTGSQSLDLDFGVFSSHFGIHFDESNLL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1476g00008 315 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00008 315 MobiDBLite consensus disorder prediction 215 233 - -
Gabi1476g00008 315 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00008 315 MobiDBLite consensus disorder prediction 78 95 - -
Gabi1476g00008 315 MobiDBLite consensus disorder prediction 78 121 - -
Gabi1476g00008 315 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00008 315 MobiDBLite consensus disorder prediction 215 252 - -
Gabi1476g00008 315 Gene3D WRKY domain 116 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00008 315 MobiDBLite consensus disorder prediction 96 121 - -
Gabi1476g00008 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 216 IPR044810 GO:0003700
Gabi1476g00008 315 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1476g00008 Gabi-Chr1476 124092 131023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1476g00008 11 203 WRKY Transcription Factor Family AT3G56400 45.078 4.38e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1476g00008 WRKY 2.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1476g00008 - - gmx:100778162 397.127