Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1476g00007 ATGGTAAAGCAGAAACACCCAGAAACCATGGAAGATGTAATAAATTCTATTCGCCACGCTTGTGAATTAGCTCAAAATCTTGAATCAAACCTACCCAACTTGGCCAATCAGCCTGCTATGCTATCCATTTCCATTGATAAGATAGTTGAGACATTGAATGCTGCCAAAGAAAAGTTATTAATCTGTCAACATGACAAAACATCAGCAGCATCTTCCTTAGCTCAGATGTGGCTTCATGAAACGCAGCATCCTCATATGGATGCAACTCTAATGCAGGAATGGCTAAGGTCTAGTTATGATCACTTGTTTCCAATGCAGCAACTTCAAGGTATGAGGAGCACGACACCTCATGATGTGGGGGCTTTGGTTGAAAGTAAGATGATGGATAATAGGGTGGATTTCTCTCAGCTAATAATGTCTAGGGACACCTTGCAGATTGGTGAAATGGGTGAGAGAGATGTGGAAGATTCCCAGAGATCGAAGGGTATTGAAGCATCACCCTCACAACCACGAAGAAGTAGCAGGAAAGTTGATTTGAAGAAGGAAAAAATTACGGTTCCTGCACCACAGTTTGGAAACACGGAGATGCCACCGGAGGATGGCTACACTTGGAGAAAATATGGCCAGAAAGATATACTTGGCTCCAAGTACCCAAGGAGTTACTACAGATGCACACACCAGAAATTATATGAATGCCAAGCCAAGAAGCAAGTGCAGCGACTTGATCGGTATCATAACATATTTGAAGTAACATATATAGGTAACCACACCTGCCATATGTCCTCCACAGCACCATCATCATCAGTTCCACCACAACAACTAGTGGTGGACATCTCACAGCAGGATCACATGACACAAAGTACAATTTCCCCACGGTTGTCTCCGTCATCAGCTTCCACTTCCGGTCTGTGGCTGTCATCAATGAACCTCAGGTTCCAGGGTGGTGGCGGTGCAAGATATGGTGGTGATTATCCAGTGGTAGATATGGCTGATGCCATGTTCAACTCTGGTAGCAGCAGCGGTAACAGTATGGAATATCTTTTCGCTCCCGCTGAAGATAAACGGGAACCAAAAGAGAAGAGAAACTGA 1089 0.4417 MVKQKHPETMEDVINSIRHACELAQNLESNLPNLANQPAMLSISIDKIVETLNAAKEKLLICQHDKTSAASSLAQMWLHETQHPHMDATLMQEWLRSSYDHLFPMQQLQGMRSTTPHDVGALVESKMMDNRVDFSQLIMSRDTLQIGEMGERDVEDSQRSKGIEASPSQPRRSSRKVDLKKEKITVPAPQFGNTEMPPEDGYTWRKYGQKDILGSKYPRSYYRCTHQKLYECQAKKQVQRLDRYHNIFEVTYIGNHTCHMSSTAPSSSVPPQQLVVDISQQDHMTQSTISPRLSPSSASTSGLWLSSMNLRFQGGGGARYGGDYPVVDMADAMFNSGSSSGNSMEYLFAPAEDKREPKEKRN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1476g00007 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 271 IPR044810 GO:0003700
Gabi1476g00007 362 Gene3D WRKY domain 188 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00007 362 MobiDBLite consensus disorder prediction 338 362 - -
Gabi1476g00007 362 ProSiteProfiles WRKY domain profile. 199 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00007 362 SMART WRKY_cls 198 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00007 362 MobiDBLite consensus disorder prediction 150 178 - -
Gabi1476g00007 362 SUPERFAMILY WRKY DNA-binding domain 195 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1476g00007 362 Pfam WRKY DNA -binding domain 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1476g00007 Gabi-Chr1476 118615 121357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1476g00007 10 353 WRKY Transcription Factor Family AT2G40740 35.311 3.09e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1476g00007 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1476g00007 - - gsj:114410180 361.688