Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1476g00005 ATGGTCTTTCGTGAGGACAAATCCACCCTCAAATTCCTCTGCAGTTACGGCGGCAAAATCCTCCCCCGCCACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGTGTCCTCGCCCTCCCTCGCTCCACTCCCTTTTCCGAGGTACTGGTGAAGTTGGAAGAGCTATGCGGCTCACACGTGACCCACTTTCGTTGCCAATTACCCTCCGAAGACCTCGACGCTTTGGTGTCCATCACCTCCGACGAGGATCTCGCAAACCTCATCGAGGAATACGACAATGTTTCGTCTTTAAAGATCAGAGCGTTCCTCTTCTCTTCACCTGCTCGGTCAAAATCTTTGTCGTCGTCATCATCTTCTTCCTCTTCATCGTCGTCTTCCTCCTCCACGTTGTCGTTTAGTTACCCTACTTGTACGGCGGTACCGCCGGCGGTGATTAGTCAGGTGTCACCGACGACAGCTACGAAGAAGTGTGCTGGGACCGGGACAAATGTTCCTCTTCCCTGTTGTGGTTACCGTGTTAAGGGGAAACGTGGTGTCGTTTACCTCATCCGCAACGGCAACCATTGGCACTAG 579 0.5458 MVFREDKSTLKFLCSYGGKILPRHPDGKLRYLGGHTRVLALPRSTPFSEVLVKLEELCGSHVTHFRCQLPSEDLDALVSITSDEDLANLIEEYDNVSSLKIRAFLFSSPARSKSLSSSSSSSSSSSSSSSTLSFSYPTCTAVPPAVISQVSPTTATKKCAGTGTNVPLPCCGYRVKGKRGVVYLIRNGNHWH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1476g00005 192 CDD PB1_UP2 13 106 - -
Gabi1476g00005 192 SUPERFAMILY CAD & PB1 domains 26 111 - -
Gabi1476g00005 192 Gene3D - 28 108 - -
Gabi1476g00005 192 PANTHER OS05G0427100 PROTEIN-RELATED 9 132 - -
Gabi1476g00005 192 SMART PB1_new 24 108 IPR000270 GO:0005515
Gabi1476g00005 192 Pfam PB1 domain 26 107 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1476g00005 Gabi-Chr1476 83608 84462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1476g00005 11 108 MAP Kinase Kinase Kinase AT2G35050 51.485 5.15e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1476g00005 - - aprc:113859578 222.631