Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1475g00001 ATGGATTTGACAACGGAGAAGAAGGAATTAGAGAGCAACAACAACAATAGCAACAATAGCAGCAATAACCCCGAAAGTGCCCATCAAATTGTAGATTCTTCTTCTCAATTGGCACCTGATGCTAACAATAACTCTAACAAAGAAGCCGAAGAGCGACAAGCTCGTGAACTCAAAGCTGGTCTTCACCCACTAAAGCATAAATTTGTATTTTGGTACACGCGTCGAGCACCTGGAGTTCGAAATCAAACATCATACGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGCCCTTCTTCTTTGCCTAGTCCAACAGATTTGCACCTTTTTAAAGAAGGGATTCGTCCATTATGGGAGGACTCTGCGAACTGCAATGGTGGGAAATGGATTATACGATTCAAGAAGGTTGTCTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTCGGTGACCAATTGGATTATGGAAGTAACATATGTGGTGCAGTATTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCTGTAATGGCTCTAAGAGATTCAATTAAACGTCACTTAAAGCTTCCTCACAGCTACGTTATGGAGTACAAGCCCCATGACGCCTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 726 0.427 MDLTTEKKELESNNNNSNNSSNNPESAHQIVDSSSQLAPDANNNSNKEAEERQARELKAGLHPLKHKFVFWYTRRAPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGSNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1475g00001 241 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 38 230 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gabi1475g00001 241 MobiDBLite consensus disorder prediction 1 52 - -
Gabi1475g00001 241 MobiDBLite consensus disorder prediction 10 44 - -
Gabi1475g00001 241 SUPERFAMILY eIF4e-like 38 237 IPR023398 -
Gabi1475g00001 241 FunFam Eukaryotic translation initiation factor NCBP 34 234 - -
Gabi1475g00001 241 Pfam Eukaryotic initiation factor 4E 63 221 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gabi1475g00001 241 ProSitePatterns Eukaryotic initiation factor 4E signature. 119 142 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gabi1475g00001 241 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 235 IPR023398 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1475g00001 29 241 Eukaryotic Initiation Factors Gene Family AT5G18110 78.404 1.93e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1475g00001 K03259 - gmx:100499744 428.713