Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1472g00014 ATGGCAGACACAAATTCAGTTGAAGTGATTTTGGACTTTCTGAGGAGGAATCGGTTTACACGAGCTGAGGCAGTTTTGCGCAGTGAGCTCAATAACCGTTCTGATGTAAATGGGTTCCTTCAGAAGCTTACATTGGAAGAAAAGACCTTGTTTGATATGGCCCAGAATGATAAGGGAAAGTCGGTGCTTGAAAATCAAGGGTTGGATTCTCGTGATAGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGAATGGTAGAAATGGTGATGAAAGCAAATGGAAAAATGCTGCTCCTGCTGTGGAAAGGAATAAATCTAATGAAGTGGTTGGGACAAGTGACAAAAACTTTACTTCCTTGAAAAGTTCGGAGGACAGTGTGCTTGATTTATACTCGCGGAAGTTTAATCTCAGCAATGGTCCTATGGAGCCTTACCAAAATGATGGTGGAAGTAGGGCTAATAATACTTTGAAGGCCCCGATGTCTCAGCAATCAAAATATCAAATGAAAGATGCTCTTGATGCTGCCAACAGTAATGCAAAATCTGGGGAGGAAAATAATGTGCCTTCCGAGAAAAAATCCTCAGGGCTTGGAACTAGTGATAAAGCTTCTATGGAACCAAATTATGGCCTTACCCCAAACAAAGAACCTAAGGAACATGATCGGCAGCTTAAATTTAATAGTTCATCTCATAAAGAGAACTTGGCAGATAATGTCTTGTCAAGAACTGACAAGAATGTGAATTCATCTACAGACCTATGGAAAGATTGTTCTGTCAAGACTGTTTTCCCTTTCTCAAAGGGGGATATGTCTACAAGCTATAATGGTTCAACTTATGCTGACAAAAAAGAGGAAAAAACAAGGGCGGAAATCAGTGATGTTAGGGCATCAATAAAAGAAGAGGTGGATGAAATCGGGAGAGCTTTTTACTTAGGAAAGTTGCAAGGCAGTTCTGAACAGAAGAACATTGGTGGGTTAATTTTTCCTTTTGCACCAGATAGTCATAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATAAAGTCAGAAGACAAACCCTTGGCTATTAATTGGGAGGAGAAGTTTGAACGTGATGGACTGGCTGCGAAACTTGCTGGTGCTGATAGCACTTTACTTATCGGGTCATATCTGGATGTCCCTATTGGACAAGAAATTAAAACTGCAGGTATGAGGAAAGCTGCAGGGGGCAGTTGGCTGTCTGTAAGTCAAGGAATTACAGAGGATACATCTGATCTTGTATCGGGTTTTACAACAGTTTGTGATGGATTGAGTGAATCTATTGACTATCCACATGAATATTGGGACTCTGATGAATATGACGACGACGACGATGTTGGATATATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAAGGGACTGGACATGGAAGTGTTCCAGATCCTCAGGAAAGAAGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCTAGCTAAGAATGTGGAGCCGGTCACAGCTTCAGATGATCCGATCGGTCTAACAGTTACCGAAATGTATGGTAGGGCTAATGGTAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGTAGACGAACTGAATTTGATGCAGGCAGAACCTGTCTGGCAGGGCTTTGTCACTCAGACAAATGATCTCATCATGCTGGGAGATGGAAAGGTTCTGAATCATAGTGGAAGATCACAACTTGAGGACATGGAAGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTGGGTATCAATAGTGATGCTGCTGATATTGGCAGTGAAGTGCGTGGAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGTGATACTGCACTTGGTGGCTCCAAACACTCTCATCATGATTTGGATAAGAATTGTATTAACAAATCGTTCAAGAACAAGAATAAAAATGACAAGAGAGAGTCAAATAAATATGTCACTGGGGGTGATAAAGATGCTTGCTCGCAGATAAAAACACATACGGATGGGAACTTCTCATTTCGCCAATCTTTTAAAGAAGGCCAGATAATTCAGGCTGGCTCCAGTACGTCCCAATGGTCAAAGAATTGTAATGCAGATGAAACAGATGACTGTATTAATGCATTTTTGGGACCCGATGACATGCTTTCTTCTTGGAGGCAGAAAAGCAGCGATTCTTCACCCAGTAAATGTTCTGGGGATGAGAATAATGCTAATGTGGTAAGATCCACAAACTCTTCTCCAACTACAGTGTCAAATTATGGTTATGCTGATAGAGAGCATGTCAAGCTAGAAAATAATGAAAAGGTTGGCATAGCAACAGAAGATGATCTAGGTGCATCACTAGAGGACGAAGAGGCTGCTGCTGTGCAAGAGCAGGTAAGGCAACTAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCCGGGCGCTATCATGTCACGGAGTATCTTGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGACCTGCACACCGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATATCAATAAGCATGATCCTGGAGACAAGTATCACATTCTGCGATTATATGATTATTTTTATTACAGAGAACATTTGTTAATTGTTTGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATAGAGAATCAGGGGGGGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTGGAAGCACTACAATTTTTGCATAGCCTTGGACTTATACATTGCGACCTGAAGCCGGAGAATATTTTGGTGAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAGACGGATCACCTTTGCTCTTATGTTCAGTCCAGGTCCTATCGTGCTCCGGAGGTTATTTTGGGGCTTTCGTATGATAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCCCCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCCATTGATCAAATTATGCTTGCAAAAGGACGTGATACATATAAGTACTTCACAAAAAATCACATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGGGACCAAGGCTTCATTGACTTTGTTGCTTATTTGCTTGAGGTTAACCCCAAGAAGAGGCCTTCTGCATCCGAGGCACTGAGGCACCCATGGTTGTCATACCCTTATGAACCAATATCATCTTGA 3552 0.4093 MADTNSVEVILDFLRRNRFTRAEAVLRSELNNRSDVNGFLQKLTLEEKTLFDMAQNDKGKSVLENQGLDSRDSVEVSKELIVKEIECGNGRNGDESKWKNAAPAVERNKSNEVVGTSDKNFTSLKSSEDSVLDLYSRKFNLSNGPMEPYQNDGGSRANNTLKAPMSQQSKYQMKDALDAANSNAKSGEENNVPSEKKSSGLGTSDKASMEPNYGLTPNKEPKEHDRQLKFNSSSHKENLADNVLSRTDKNVNSSTDLWKDCSVKTVFPFSKGDMSTSYNGSTYADKKEEKTRAEISDVRASIKEEVDEIGRAFYLGKLQGSSEQKNIGGLIFPFAPDSHKEEFPRLPPVKIKSEDKPLAINWEEKFERDGLAAKLAGADSTLLIGSYLDVPIGQEIKTAGMRKAAGGSWLSVSQGITEDTSDLVSGFTTVCDGLSESIDYPHEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERSPAKDEDDDQSFAEEDSYFSGEQYLLAKNVEPVTASDDPIGLTVTEMYGRANGNDLMAQYDGQLMDVDELNLMQAEPVWQGFVTQTNDLIMLGDGKVLNHSGRSQLEDMEDDQHGSVRSIGVGINSDAADIGSEVRGSLVGGSSEGDLEYFRDRDTALGGSKHSHHDLDKNCINKSFKNKNKNDKRESNKYVTGGDKDACSQIKTHTDGNFSFRQSFKEGQIIQAGSSTSQWSKNCNADETDDCINAFLGPDDMLSSWRQKSSDSSPSKCSGDENNANVVRSTNSSPTTVSNYGYADREHVKLENNEKVGIATEDDLGASLEDEEAAAVQEQVRQLKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYINKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQIMLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAYLLEVNPKKRPSASEALRHPWLSYPYEPISS 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1472g00014 1183 Gene3D Phosphorylase Kinase; domain 1 866 953 - -
Gabi1472g00014 1183 FunFam Serine/threonine-protein kinase ppk15 951 1175 - -
Gabi1472g00014 1183 SMART serkin_6 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1472g00014 1183 ProSiteProfiles Protein kinase domain profile. 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1472g00014 1183 PANTHER DUAL SPECIFICITY PROTEIN KINASE 419 1174 - -
Gabi1472g00014 1183 Coils Coil 814 844 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 672 688 - -
Gabi1472g00014 1183 Gene3D Transferase(Phosphotransferase) domain 1 926 1174 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 110 127 - -
Gabi1472g00014 1183 FunFam Putative serine/threonine-protein kinase dyrk2 866 953 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 141 227 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 183 211 - -
Gabi1472g00014 1183 SUPERFAMILY Protein kinase-like (PK-like) 861 1176 IPR011009 -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 107 127 - -
Gabi1472g00014 1183 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672|GO:0006468
Gabi1472g00014 1183 Pfam Protein kinase domain 872 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1472g00014 1183 CDD PKc_DYRK_like 872 1174 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 751 788 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 143 176 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 479 509 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 672 691 - -
Gabi1472g00014 1183 MobiDBLite consensus disorder prediction 751 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1472g00014 Gabi-Chr1472 147526 158968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1472g00014 871 1169 MAP Kinase Gene Family AT5G19010 30.599 1.64e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gabi1472g00014 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1472g00014 - - gmx:100798608 1965.27