Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1472g00008 ATGAATGCTTCAACTAGGAAAAAGGTTCAGAGGAAGTGCAAGATCAGAGGCTACAATCTCAAAGTTGAAGCTCTCGATGAGATCCTCTCCTTCGTTTCTCGATTCGAAGGCCCCGATGAAGACGAAGCTATCGATCTCCTCCTCGATCAACTCGAACAAGAATCTCTGAAATCCACCATAATCGACAAGGAGCCGGTGCACCGTGTGGTGAGCCTGCTATTGGAAGCTGAGGCGACGGTGGAGGAAAATTCCGATGCGTCTGCCACCGCTGCTTCAGCCATTCGCGTCGTTGATGCATTCCTGATCCCCAAATATAAATACGATCCTATCAGAAAGCAATTCTATGAGCACACTAGCAGCTTACCTATTCATGGGGAAGCATCAGCAAAAACGGCCTTGTATAAGAATAGGTTTCTATTGTTGTTTCAGAGGCTCTCTCGTGATCAGCATTTTTCCAAGCGTGCTTTTGATTCTGAATTTTCACATTTCGGGAGCTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTTGAGGATGGGCATTTTTATTTGGAAGACCTTACCGCTTCAGTTGAAATCAATTTATCTAATGCTAAGATAACTACAGGATTCTTTTTAGAGAATACCATAGTTGTGGCTGAAGGCGAGATGCTTGTGGAGGGTATTTTTCAGGTTTTAACATGTGGATTTCCCCCATTGGAGGATAGAAATAAGTCACTTAAACAACTTGCAGGGCATGACTTTTTTGGTGGTGGTATTTTTACAAAAGAGGAAACTATCAGACTGGAAGAAATGGAGAAAAGAGCAGTCAATGACATGTTTGTTATACTATCTGATATTTGGGTCGACAATGAAGAGGCTTTGGGAAAGCTAGAGACTGTTCTGGATGGTTTTGAGAGTGTGGAAGTAGTTCCTTCCTTATTTGTTTTCATGGGAAACTTTTCTTCTCACCCATGTAACCTTTCATTTCACTCTTATTCGAGCCTCAGGATGCAGTTTGGCAAGCTAGGCCAAATGATTGCTTCCCATTCACGGCTAAAAGAGAACAGTCGATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCATCAACGGTTCTTCCTAGGTGTGCTCTACCAAAATATTTAACTGAGGAGCTCCAAAAGCATATTCCCAATGCCATATTTTCAAGCAACCCTTGCAGGATCAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAGGATCTGCTATATCGAATGCGTCGTTCTTGTTTAATGCCTCCTTCTAAGGAAGAAACTGATGATCCTTTTCAGCATCTTGTTGCTACCATAACCCATCAGAGTCATCTTTGCCCACTCCCTCTAACTGTACAACCCATCATCTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCACACGCGATAGTTTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATCCTGGGTCTTTCTCAATTGACAGCACCTTTGTGGCTTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAA 1590 0.4264 MNASTRKKVQRKCKIRGYNLKVEALDEILSFVSRFEGPDEDEAIDLLLDQLEQESLKSTIIDKEPVHRVVSLLLEAEATVEENSDASATAASAIRVVDAFLIPKYKYDPIRKQFYEHTSSLPIHGEASAKTALYKNRFLLLFQRLSRDQHFSKRAFDSEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLENTIVVAEGEMLVEGIFQVLTCGFPPLEDRNKSLKQLAGHDFFGGGIFTKEETIRLEEMEKRAVNDMFVILSDIWVDNEEALGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLSFHSYSSLRMQFGKLGQMIASHSRLKENSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSKEETDDPFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHAIVLGDRSQQKAFKYTGITCFNPGSFSIDSTFVAYRPCSQEVELSAL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1472g00008 529 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
Gabi1472g00008 529 Pfam DNA polymerase alpha/epsilon subunit B 287 492 IPR007185 GO:0003677|GO:0006260
Gabi1472g00008 529 Gene3D - 2 71 - -
Gabi1472g00008 529 PIRSF DNA_pol_epsilon_2 1 529 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1472g00008 16 486 Core DNA Replication Machinery Family AT5G22110 72.399 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1472g00008 K02325 - qsa:O6P43_008430 922.924