Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1470g00025 ATGGGAAGAAGTAGGCTTGTGGTGTCGGATTTTGTTATGTCTTTCATGTGGGTATGGTCTGGTGTTCTGGTTCGGATTTTTGTCTTCAAAATTCTGGGGTTGGGTCATGGTAACGGTCATCTCGGTGAGTTTCTGAAGGCTGCGTTCTCCGTCGCCAACATGTTCTTCTTTGCGTTCCTTTCCAAGGTTACCCGTGGTGGGGCCTACAATCCCCTTACCGTCTTTGCTGATGCTATCTCTGCTGATTTCAACAATTTCCTTTTCTGTGTTGGTGCCAGAATTCCCGCTCAGGTGGTTGGATCTATTGTTGGAGTTAAGCTTATTATTGACACGGTTCCTGAAGTAGGACGGGGACCAAGTTTGAATATTGACATTCATCGTGGTGCATTGACAGAAGGATTACTAACATTTGCAATTGTAACCATTTCACTTGGTCTTGCCATAAAAGTTCGTGAAAGTTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGCTAACACTTCATATACTTGGTTCTGATCTGACTGGAGGTTGTATGAACCCTGCGTCAGTGATGGGATGGGCTTATGCTCGAGGGGATCACATAACAAAGGAGCACATCCTTGTATACTGGCTTGCCCCCATAAAGGCAACTATTTTGGCAGTGTGGACATTCAAATTGCTATTGAGGCCTGTAAAAGAAGATAAAACGGGCTCAAAAAGTAAATCGGATTGA 717 0.4449 MGRSRLVVSDFVMSFMWVWSGVLVRIFVFKILGLGHGNGHLGEFLKAAFSVANMFFFAFLSKVTRGGAYNPLTVFADAISADFNNFLFCVGARIPAQVVGSIVGVKLIIDTVPEVGRGPSLNIDIHRGALTEGLLTFAIVTISLGLAIKVRESFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIKATILAVWTFKLLLRPVKEDKTGSKSKSD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1470g00025 238 SUPERFAMILY Aquaporin-like 5 229 IPR023271 -
Gabi1470g00025 238 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1470g00025 238 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1470g00025 238 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1470g00025 238 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1470g00025 238 PRINTS Major intrinsic protein family signature 162 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1470g00025 238 PANTHER AQUAPORIN SIP2-1-RELATED 1 238 IPR044226 GO:0015267
Gabi1470g00025 238 Gene3D Glycerol uptake facilitator protein. 3 238 IPR023271 -
Gabi1470g00025 238 Pfam Major intrinsic protein 5 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1470g00025 Gabi-Chr1470 144774 148501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1470g00025 1 238 Major Intrinsic Protein MIP AT3G56950 60.084 2.30e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1470g00025 K09875 - gmx:100786138 400.208