Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1470g00007 ATGGGATCTCAAAGTGGGGGAATCCAAGAGCCAAAGACAGGTTCTTTGGCTACGCAAGGGTCCTTGTACAATCTCACCCTTGATGAGGTGCACAACCATCTTGGGGATTTAGGGAAACCCCTAGGAAGCATGAATCTGGATGAGCTTGTCAAGAGTGTGTGGAGTTCTGGAGCTGGTCATGCCTCTGGATTGGATTCTGGTACTGAATCTTATATGCAGCATGGTCAGCTAGCTTCTTCTGTGTCATCTTTGAATCCACAGGGAAGCCTAACAATGTCTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTACTACTCAGGAAAGACAACCTACACTCGGTGAGATGACTCTGGAAGATTTCTTGGTAAAGGCTGGTGTGGTTACTGAATCTTTTCATGCTGAGGATAATGCTATGTCAGTGGTTGATTCCCAAAATAATGAATCACAGCATGCTCATTGGATTGGATACCAGCTTACTTCTGTGCAGCAACAGCAACAGCATCAAAATCAGCAGAATAATATGATGTCTGGTTTTCCGGGTTTTATGGCTGGCCATGTGGTTCAACAGCCAATCCAGGTGAATACAGTTTTGGATGGAGGATACTCTGAACCAATGGTGACTATGTCACCAACTTCTTTAATGGGTACCTTATCAGATACACAAACTCCAGGTAGGAAAAGGTTTGCCTCAGGGATTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAAAGGATGATTAAAAATAGGGAATCTGCAGCTAGGTCACGGGCTAGAAAACAGGCTTACACACATGAACTGGAGATTAAAGTTTCACATTTAGAGGAAGAGAATGAAAGGCTAAGAAGGCAGCATGAGATAGAGAGGGAGTTGCCAAGTGTGCCACCACCTGAACCTAAACATCAGCATCGCAGAACTAGTTCAGCTCCCCTTTGA 963 0.4465 MGSQSGGIQEPKTGSLATQGSLYNLTLDEVHNHLGDLGKPLGSMNLDELVKSVWSSGAGHASGLDSGTESYMQHGQLASSVSSLNPQGSLTMSGDLSKKTVDEVWRDMQQKKSTTQERQPTLGEMTLEDFLVKAGVVTESFHAEDNAMSVVDSQNNESQHAHWIGYQLTSVQQQQQHQNQQNNMMSGFPGFMAGHVVQQPIQVNTVLDGGYSEPMVTMSPTSLMGTLSDTQTPGRKRFASGIVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSHLEEENERLRRQHEIERELPSVPPPEPKHQHRRTSSAPL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1470g00007 320 Gene3D - 248 300 - -
Gabi1470g00007 320 MobiDBLite consensus disorder prediction 285 314 - -
Gabi1470g00007 320 Coils Coil 273 300 - -
Gabi1470g00007 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
Gabi1470g00007 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 17 319 IPR043452 GO:0003700|GO:0045893
Gabi1470g00007 320 SMART brlzneu 246 314 IPR004827 GO:0003700|GO:0006355
Gabi1470g00007 320 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 248 300 - -
Gabi1470g00007 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700|GO:0006355
Gabi1470g00007 320 Pfam bZIP transcription factor 250 293 IPR004827 GO:0003700|GO:0006355
Gabi1470g00007 320 SUPERFAMILY Leucine zipper domain 250 298 IPR046347 GO:0003700|GO:0006355
Gabi1470g00007 320 CDD bZIP_plant_BZIP46 250 305 - -
Gabi1470g00007 320 MobiDBLite consensus disorder prediction 285 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1470g00007 Gabi-Chr1470 23094 26760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1470g00007 1 320 bZIP Transcription Factor Family AT3G56850 54.491 1.09e-102 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1470g00007 bZIP_1 3.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1470g00007 K14432 - gmx:100783666 446.047