Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1468g00025 ATGAAGGATAAGGAGAAAGAAAAGGAAACCGAGAAGAAGAAGTACCCCATTGGACCCGAACATTACCTTCTCTATGAAGAGATTGGACAGGGTGTTAGTGCTTCTGTTCACCGCGCTCTCTGTCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGATTTTGAACGTGACAATTGTGATCTGAATAATGTTTCTCGTGAAGCCCAAACAATGATCCTGGTGGACCACCCTAACGTCCTGAAATCACACTGCTCCTTCGTCAGCGACCATAATCTGTGGGTTGTGATGCCATTCATGGCCGGCGGTTCATGCCTTCACATATTGAAAGCCGAACATCCTGATGGTTTTGAGGAGGTTGTTATAGCAACCGTTCTCAGAGAGGTCTTGAAGGGTTTAGAGTATCTTCATCATCATGGCCACATCCACAGAGACGTCAAGGCTGGCAACATTCTCCTCGATTCACGCGGTGCTATCAAGCTTGGCGATTTTGGTGTTTCTGCTTGCCTTTTTGATTCTGGTGACAGGCAACGCACCAGGAATACATTTGTCGGAACACCTTGCTGGATGGCACCCGAGGTCATGGAGCAATTGCATGGTTATAACTTCAAAGCTGACATCTGGTCGTTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTTCCCACCCATGAAGGTACTGCTTATGACTTTGCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCTCTAAGTCATTTAAGCAGATGATTGCTAGTTGCTTAGTAAAAGATCCTTCAAAGCGACCCTCTGCAGGCAAGTTGTTAAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATTATATTTTACGAACACTTTTGGAGGGGCTGCCTGCTTTAGGTGATCGGGTGGAGGCTATAAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGGAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATATTGAAGATATGAAGGCTCAGGCTTCCTTGATCCACGATTTTGACGACGCTATATCGGATATCAACCACGTAGCAAGTTCAAGCTCTTTATCTGCACTTGATGCACAAGATAAGCAATTGCCAAGTGCAATTCATAACCCTTCTCCAACTGCTGATATGGAAGATAATGGTGAGATGCAAAATCAACCAGCTTCAGTTGCAGTTGGTGATTCGACAGTAAATGATGCCAAGACTAGTATTGAAAAATCTGGAGATGTCTCTAGCATCACCAGTTCAAGCCATGAAGCACAAACTTCTTCGACCTATCTTGATGATCATGTGGAACATAATTTGGGGGAAAAATCTGATATGGAAAGTGGTGGAAGATCCATGGAGGGCATGGCTACCCATTCTCATCATAGAAGAGGATGCTCATCAAGCATCTTACCTGAAGCTACTGTTCCACCTATTCGACTAGAAAGTGAGAAGCTACAAAATCTGCCCCAGAACATTTCAAGTTGCAATGCAACTTCCGTTTCACAGACAGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAATCTCAAAATCATCAGCTAATTCTGAAGACACTGATGAGAAAGCAAAGATACCAGTTGTTCAACAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGATTTTCTTTCAGGTGGCCCCTACTCCTGTACTGCAAAAGAGTCACAGCATGCAGGTTTTTGGCCAGCATAATGCTGCTCCACTACCTTCACCTTTACCATTATTATCAGCATCTGATGCTGCAACATCAAATCTTTCTGGCTGTTCTCTGTTCCCTTTGCTGCACTCTCTGCTGCAGACAAATGTTATTCAAAGGGAAAGCATTTTAAGTTTAATGAAGCAAATTACTACTGGTGACTCTACAGCTGATGGCACATGTACCCCCGCACAGATAGTAGCAATTGAGAAATCTTCACTTGAAGCAGCTCACGATAGGGAGAAGGAGTTACTTCATGAGATAACTGAGTTGCAGTGGAGGCTCATATGTACCCAAGAGGAGCTTCAAAAATCGAAAACAGAAAACGCCCAGGTTAGTATCAACATATATTGTTCCCAATATTCGAGTATCATATTTTGGATTATGTATTTGACATTTTAA 2187 0.4348 MKDKEKEKETEKKKYPIGPEHYLLYEEIGQGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAEHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILLDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAGKLLKHSFFKQARSSDYILRTLLEGLPALGDRVEAIKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNIEDMKAQASLIHDFDDAISDINHVASSSSLSALDAQDKQLPSAIHNPSPTADMEDNGEMQNQPASVAVGDSTVNDAKTSIEKSGDVSSITSSSHEAQTSSTYLDDHVEHNLGEKSDMESGGRSMEGMATHSHHRRGCSSSILPEATVPPIRLESEKLQNLPQNISSCNATSVSQTGEDVLTELPSRISKSSANSEDTDEKAKIPVVQQRGRFKVTSENVDPEKVIFFQVAPTPVLQKSHSMQVFGQHNAAPLPSPLPLLSASDAATSNLSGCSLFPLLHSLLQTNVIQRESILSLMKQITTGDSTADGTCTPAQIVAIEKSSLEAAHDREKELLHEITELQWRLICTQEELQKSKTENAQVSINIYCSQYSSIIFWIMYLTF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1468g00025 728 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1468g00025 728 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Gabi1468g00025 728 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Gabi1468g00025 728 MobiDBLite consensus disorder prediction 425 451 - -
Gabi1468g00025 728 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 336 - -
Gabi1468g00025 728 MobiDBLite consensus disorder prediction 425 487 - -
Gabi1468g00025 728 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1468g00025 728 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Gabi1468g00025 728 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1468g00025 728 MobiDBLite consensus disorder prediction 452 466 - -
Gabi1468g00025 728 CDD STKc_OSR1_SPAK 20 283 - -
Gabi1468g00025 728 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Gabi1468g00025 728 Gene3D Transferase(Phosphotransferase) domain 1 103 336 - -
Gabi1468g00025 728 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 702 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1468g00025 Gabi-Chr1468 99206 106940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1468g00025 11 689 MAP Kinase Kinase Kinase Kinase AT1G79640 64.047 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi1468g00025 Pkinase 9.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1468g00025 K08835 - gmx:100780339 1207.2