Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1468g00001 ATGGATTCAAAGAAGTCTAACAAGATTAGAGACATTGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAGGTTGCAAATGCTTCCAAGAGCAACTCTGCCTCTGCTACTACTACGGCCACTACCACCGTCGTCACCACCACCAGTAAAGGAATCCTGTTTTTAAAACGAACACTGTCGTTCACAGATGTTTCTTCAAATGACATCGTTCCAAAAGGGTTTCTCGCTGTTTGTGTTGGGAAAGAGCTCAAGAGATTCATTATTCCAACAGATTATTTGAGACACCAAGCATTTGAGATGTTGCTGCGAGAAGCCGAAGAGGAATTTGGTTTCCAGCAAGTGGGTGTGCTCAAAATTCCATGCCAAGTATCAGTGTTTGAAGAAATATTGAAGATGGTGGAAGATAAAAAAGAAGAATTGCTCAGCTTGCATGATTCTGAGTCTGATTTCAGTGGAGAGAAGGACAAGATTACTCCCACTCAACATGCTCAAATGTGTAGATGA 504 0.4147 MDSKKSNKIRDIVRLQQILKKWKKVANASKSNSASATTTATTTVVTTTSKGILFLKRTLSFTDVSSNDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLREAEEEFGFQQVGVLKIPCQVSVFEEILKMVEDKKEELLSLHDSESDFSGEKDKITPTQHAQMCR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1468g00001 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 129 IPR003676 GO:0009733
Gabi1468g00001 167 MobiDBLite consensus disorder prediction 148 167 - -
Gabi1468g00001 167 Pfam Auxin responsive protein 20 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1468g00001 Gabi-Chr1468 3974 4477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1468g00001 1 166 Calmodulin-binding Proteins AT2G24400 56.213 2.02e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1468g00001 K14488 - fve:101309563 187.193