Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1465g00021 ATGGCACAACTCAACCTCACATTGCTAGTCACTTTCATCTTTCTCTTCTTTTCAATTCTTGCCCATGTTGAACCATCCTTGGCCAAGCATGATTCACAAACAATGACCTACGTGGAGTCCTCTTGCAATGGCACCCTCTACCCAGATCTTTGCATTCGTTGCCTTCAAAAATTTGTCAACAACTCCACCATAGATGGTCCTCAACACTTAGCACATGTTGCCTTATCAGTGAGCCTCTCTAGAGCACTACAAACAAGATGGTACTTGTTGAAAGTGGCAAAGGAACTCAAGGAAATAAAGAACAAAAGGGAGTACCTAACGGTAGAAGATTGCGTGAATCAAATCACTGATAGTGTGGACCAACTTAGCCAAGCCATTAAAGAACTAAGAAGGTTCAACGACCAAGGTGGTAGCAACACCATCAATGATGATGTCTTGTGGCACATAAGTAATGTTGAAACATGGGTGAGTACTGCTTTAACAGATGCTAGCAGTTGTGTGTATTCGTTCCCTGGTCATAGGATGAGTAAGAGAGCAGCTTCTATTAGGGTTAAGGCCAAGAATGTTGCAGAAGTCACTAGTAATGCACTTGCTTTGTTTCATAGATATGCATCTAAGTACATGCAAGAAGCAGCTAGAACCACCAAGAAGCCTTAA 657 0.4216 MAQLNLTLLVTFIFLFFSILAHVEPSLAKHDSQTMTYVESSCNGTLYPDLCIRCLQKFVNNSTIDGPQHLAHVALSVSLSRALQTRWYLLKVAKELKEIKNKREYLTVEDCVNQITDSVDQLSQAIKELRRFNDQGGSNTINDDVLWHISNVETWVSTALTDASSCVYSFPGHRMSKRAASIRVKAKNVAEVTSNALALFHRYASKYMQEAARTTKKP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1465g00021 218 CDD PMEI-like_3 40 205 - -
Gabi1465g00021 218 SMART PMEI_2 33 199 IPR006501 GO:0004857
Gabi1465g00021 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 199 - -
Gabi1465g00021 218 Pfam Plant invertase/pectin methylesterase inhibitor 37 199 IPR006501 GO:0004857
Gabi1465g00021 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 203 IPR035513 -
Gabi1465g00021 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 203 IPR035513 -
Gabi1465g00021 218 NCBIfam pectinesterase inhibitor domain 12 203 IPR006501 GO:0004857
Gabi1465g00021 218 FunFam Pectinesterase inhibitor 3 33 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1465g00021 Gabi-Chr1465 197451 198107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1465g00021 25 200 Carbohydrate Esterase AT3G49220 26.816 1.04e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1465g00021 - - gmx:100791798 308.145