Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1465g00007 ATGGCAATTAATCATGATTTGTCTCAGCCCCTAATCACACCCCGGCCAAGATCAACCTGGGACAACATCGTCGCAGCCGTTTACAGATTCTGGAACTTCGTCATCGTCGAGCATGTTCTCCTTCTCTGGAACTTCGTCGTCGACCGCTTTCGCCGTCTCTGGAACTCCGTCATCGTCGAACCCTTTACCCGTTTCTGGAACTTCGTCGTCGTCGAACCCTTTCGCCGTCTCAGGAACTTCGTCGTCGACTGCTTTCGCCGTCTCCGGAGCATCATTGTTGAGAATGTTCGCCGTCTCTGGAACTCGTTCCCCGAGCCCGTTCGCCGCAACTTGAGAACCTTCTTCGAAGCCGTTCGAAGTCTCTGGAGCAAAGTCGCCGGACCCGTCAGCCGTTTCAATCGCGATCACCGGAGATCCCTGATGGCAGGTGTGGCCGAGTTCATGTCAACATTCATCTTCGTCTTCGTCGGCTCCGGTTCCAGCATGGCCGTCAACAAGCTCAACGGCGACAAAGCCACCGATGATGGCCTCATCTCCACCGCCATCGCCCACGCGTTAGCCTTCATCGTCTCCGTCTCCATCTCCACCGGCTACTCCTCCGGGCACGTCAACCCCGCCGTCAGCCTTGGCGCCTTCATCGGCGGCAACATCACAATCCAGCGCTGCGTGCTCTACTGGTTCGCCCAGCTGCTGGCCTCCATCGTCGCCTGCGCAGTCCTCATGCTCGCCACCACCGGACAGAGTTTGCCGGTGTTTGGATTTTCCGAAGGAGTGAAAGTGAAGAACGCCGTGGTCTTAGAGATGGTGATGACGTTCACGTTGGCGTACACGGTGTACGCCACCAGTGATGATACGCAGTTGCAGCCGGATAAGAAGGATACTAAGGGAACGAAAAAGAAGAAGACTAAGTTGAGAATTATTGCACCGATCGTAATCGGGTTCATTGTTGGAGCGAATGTTATGGTGGGTGGGGTTTTTGATGGGGCATCCATGAACCCGGCTCTGTCGTTTGGGCCTGCTCTGTTGAGTTGGAAATGGGCCGGTCATTGGGTCTATTGGGTTGGGCCCGTCGTTGGTGCTGCCTCTGCTGGGTTTATTTATGAGATGGTCTATATTAGCTCCGGCAGCTCCGGCAGATCCGGCACTCGGCCACGACGGTGA 1161 0.5581 MAINHDLSQPLITPRPRSTWDNIVAAVYRFWNFVIVEHVLLLWNFVVDRFRRLWNSVIVEPFTRFWNFVVVEPFRRLRNFVVDCFRRLRSIIVENVRRLWNSFPEPVRRNLRTFFEAVRSLWSKVAGPVSRFNRDHRRSLMAGVAEFMSTFIFVFVGSGSSMAVNKLNGDKATDDGLISTAIAHALAFIVSVSISTGYSSGHVNPAVSLGAFIGGNITIQRCVLYWFAQLLASIVACAVLMLATTGQSLPVFGFSEGVKVKNAVVLEMVMTFTLAYTVYATSDDTQLQPDKKDTKGTKKKKTKLRIIAPIVIGFIVGANVMVGGVFDGASMNPALSFGPALLSWKWAGHWVYWVGPVVGAASAGFIYEMVYISSGSSGRSGTRPRR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1465g00007 386 CDD MIP 142 370 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 SUPERFAMILY Aquaporin-like 136 372 IPR023271 -
Gabi1465g00007 386 ProSitePatterns MIP family signature. 202 210 IPR022357 -
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 221 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 184 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 266 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 313 335 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 350 370 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PRINTS Major intrinsic protein family signature 141 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi1465g00007 386 PANTHER AQUAPORIN-8 136 373 IPR034294 -
Gabi1465g00007 386 Gene3D Glycerol uptake facilitator protein. 133 377 IPR023271 -
Gabi1465g00007 386 Pfam Major intrinsic protein 139 367 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1465g00007 Gabi-Chr1465 46826 49687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1465g00007 139 374 Major Intrinsic Protein MIP AT2G36830 55.696 9.55e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1465g00007 K09873 - gmx:100820403 282.337