Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1464g00025 ATGGGGTGGGGTCACATTGGAAGTCATGGCTACTCCACCTCAGATTCCGGTAACGTTGCGGAGGCAGGTCCTAGCACCACCACCGCACCACGGCGGTTCCCTCTGGCGGCTCAGCCGGAGATGATGCGAGCTGCTGAGAAGGATGATCAATATGCCTCTTTCGTTTATGATGCTTGTCGCGACGCCTTCCGCCACCTCTTTGGTACGAGAGTTGCGGTTGCTTACCAAAACGAGACAAAACTTTTAGGGCAAATGCTTTACTATGTTCTCACAACAGGCTCTGGACAACAAACCCTTGGAGAGGAATACTGTGACATCACTCAGGTTGCAGGACCTTATGGACTTCCTCCTACCCCTGCAAGGCGCACTCTTTTCATTGTTTACCAGACAGCTATTCCTTATATTGCAGAAAGGATTAGTTCTAGAATTGCTTCCCGAGGCATTTCCCTAGCTGACTCGGAGTCTGCTGAGAGTTATGGTGAAACTGCCCACGAGAGCAGTAGTTCTCGCGTTTCTGCCGCGGGTGAACTCCCTCCTTCGTCCTCATCAGGACGATCTTTTACAACTCTGACAAGGTTGAAGGAGAAACTGAGTAGATTTTGGTTGCATTTGGTTCAGAGATGGCCTACGATGCTCCCTTTTGTTCGCGAATTGTTGCAGTTGGTTCTTCGTGCTAACCTCATGTTGTTCTACTTCGAAGGCCTCTATTATCATATATCCAAACGTGCTGCAGGCATTCGTTATGTGTTTATTGGAAAAGCATCTAATCAAAGACCCAGATACCAAATACTTGGAGTATTTCTGCTGATTCAACTTTGTGTAATAGCTGCTGAAGGGCTGCGTCGAAGAAATTTAACTTCAATTGCTGGTTCAGTTCATCAGGCGTCCTTTGTAACCCACCATAGATCTGCAGGACATGGTTTGCCTGTTTTAAATGAAGAAGGCACTCTGGCAGCTCCAGATACCGACAAAGGAAGTTGGGTCTCTGATTCTTCATCTTCCGAGTATCGTGCAACTAGTGGAGTTAGCAAATGCACACTTTGCCTGAGTAATCGTCAACATCCAACAGCTACTTCCTGTGGCCATGTATTCTGCTGGAACTGTATCACAGAATGGTGCAACGAAAAGCCAGAATGCCCTCTTTGCCGCACCCCCATAACACACTCAAGTCTAGTTTGTGTTTATCATTCGGACTTCTAG 1200 0.4742 MGWGHIGSHGYSTSDSGNVAEAGPSTTTAPRRFPLAAQPEMMRAAEKDDQYASFVYDACRDAFRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRTLFIVYQTAIPYIAERISSRIASRGISLADSESAESYGETAHESSSSRVSAAGELPPSSSSGRSFTTLTRLKEKLSRFWLHLVQRWPTMLPFVRELLQLVLRANLMLFYFEGLYYHISKRAAGIRYVFIGKASNQRPRYQILGVFLLIQLCVIAAEGLRRRNLTSIAGSVHQASFVTHHRSAGHGLPVLNEEGTLAAPDTDKGSWVSDSSSSEYRATSGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPITHSSLVCVYHSDF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1464g00025 399 MobiDBLite consensus disorder prediction 159 186 - -
Gabi1464g00025 399 ProSitePatterns Zinc finger RING-type signature. 360 369 IPR017907 -
Gabi1464g00025 399 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 34 397 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Gabi1464g00025 399 MobiDBLite consensus disorder prediction 9 25 - -
Gabi1464g00025 399 Pfam Zinc finger, C3HC4 type (RING finger) 344 388 - -
Gabi1464g00025 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 396 IPR013083 -
Gabi1464g00025 399 Pfam Pex2 / Pex12 amino terminal region 48 281 IPR006845 -
Gabi1464g00025 399 MobiDBLite consensus disorder prediction 1 33 - -
Gabi1464g00025 399 ProSiteProfiles Zinc finger RING-type profile. 345 383 IPR001841 -
Gabi1464g00025 399 FunFam Peroxisome biogenesis factor 10 320 396 - -
Gabi1464g00025 399 SMART ring_2 345 382 IPR001841 -
Gabi1464g00025 399 CDD RING-HC_PEX10 343 394 - -
Gabi1464g00025 399 SUPERFAMILY RING/U-box 344 388 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1464g00025 329 395 C3H Transcription Factor Family AT4G28270 28.916 4.77e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1464g00025 K13346 - gmx:100783914 698.353