Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1464g00020 ATGAAGAAGAGTAGCAGTGTCAGTACGTCTGGACCACGTGCTGTTGAGTCATTGCATGATTTGACCAAAGATGAGTACTTTGTGTGCAAACGAGGATGTTTCAGTTTCAGTTATGTTCATGTCCCAGAAGAGATAGAGTGGCACATGCTTGACAAGTCCAAGTTCTTCATCCTAGGAGCAGCTTTGTTCTCAGGTCTATCAGCTGCTCTTTACCCTGTTGTTGTGTTGAAGACACGCCAACAAGTTTCCTCAGCAAACATCTCTTGCCGAAACATGTCTTCTTCCATCATGCTCCACGAAGGTTTTAGATGTTTCTACAAAGGTTTTGGCACTTCCTTGATGGGAACAATCCCTGCACGTGCGCTTTACATGTCAGCACTCGAAGTTACAAAGAGCAACGTTGGCAATGTTACTGTTCAGTTGGGGTTTTCAGACACCACTGCCATGACCATAGCTAATGCTGCTGGAGGGTTAGCTTCTGCTTTGGCTGCACAATTAGTGTGGACCCCAGTTGATGTTGTAAGCCAAAGACTTATGGTTCAAGGAAGCTGCAAAAATGTTTACAAGAATAGTTTTGATGCTTTTAGGAAAATTCTATGTGCGGATGGACCAAGAGGGTTCTATAGGGGATTTGGGGTTTCAATTGTGACTTATGCACCATCTAACGCGGTTTGGTGGGCTTCTTATTCAATGGCACATAGGCTTATTTGGGGTGCTTTTGGTTGCTATATGGGTAAGAGGGATCATGAGCGTGGTTTTGTTAATGGTTGTGATTTTAGGCCTAATTCAAGTGCAATGATAGGTGTACAAGGTTTGAGTGCGGTTATGGCTAGTGGAATTTCAGCAGTTATGACTATGCCACTTGACACAATCAAGACAAGGTTGCAGGTTTTGGATGCAGAGGAGAATGGACGAATGAGGCCACTAACTTTTGTGCAAACAGTTCGGAATATGGTGAAGGAAGGTGGAATCTTAGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCTTATCTGCCACAACCATGATTACTACCTATGAGTTCTTGAAACGGATTTCTGCCAAGAATGTAGACAAATTTACTGCATAA 1098 0.4362 MKKSSSVSTSGPRAVESLHDLTKDEYFVCKRGCFSFSYVHVPEEIEWHMLDKSKFFILGAALFSGLSAALYPVVVLKTRQQVSSANISCRNMSSSIMLHEGFRCFYKGFGTSLMGTIPARALYMSALEVTKSNVGNVTVQLGFSDTTAMTIANAAGGLASALAAQLVWTPVDVVSQRLMVQGSCKNVYKNSFDAFRKILCADGPRGFYRGFGVSIVTYAPSNAVWWASYSMAHRLIWGAFGCYMGKRDHERGFVNGCDFRPNSSAMIGVQGLSAVMASGISAVMTMPLDTIKTRLQVLDAEENGRMRPLTFVQTVRNMVKEGGILACYRGLGPRWASMSLSATTMITTYEFLKRISAKNVDKFTA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1464g00020 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 355 IPR018108 -
Gabi1464g00020 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 133 IPR018108 -
Gabi1464g00020 365 SUPERFAMILY Mitochondrial carrier 48 352 IPR023395 -
Gabi1464g00020 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 147 235 IPR018108 -
Gabi1464g00020 365 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 41 359 - -
Gabi1464g00020 365 Pfam Mitochondrial carrier protein 271 359 IPR018108 -
Gabi1464g00020 365 Pfam Mitochondrial carrier protein 60 133 IPR018108 -
Gabi1464g00020 365 Pfam Mitochondrial carrier protein 152 237 IPR018108 -
Gabi1464g00020 365 Gene3D Mitochondrial carrier domain 52 363 IPR023395 -
Gabi1464g00020 365 PRINTS Mitochondrial carrier protein signature 106 124 IPR002067 GO:0055085
Gabi1464g00020 365 PRINTS Mitochondrial carrier protein signature 157 179 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1464g00020 Gabi-Chr1464 113536 115270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1464g00020 39 363 Chloroplast and Mitochondria Gene Families AT1G72820 64.970 3.76e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1464g00020 K15121 - cave:132184272 492.271