Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1464g00018 ATGACAGATAGAAATCCAAGACAAGCAGATTCACCTGACAGCGTCACCAACCAGTGGCCTTTTGAACTGTCTGAGTACTTGAAATTCGATGATAATCAATGGCTACATGATGATCAAGAGTCATTTGTTTCTGAGCATGTTTCAAAACAGGTCTATGAAGCCAATGAAGAACGTGACTTTGGAGGAGGTGGCAGCTACTTTGTGGGGTCTTCTAGCAGAGATGCTGGCAATGGATGCGAGAAGAAGGAAATTAGAGAGAGAGTTGCATTCAAAACAAAGTCAGAGGTTGAAATACTAGACGATGGATACAAATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAGCCCCTATCCAAGGAATTACTATAGGTGTTCTGTGGACGGATGCCCTGTAAAAAAGAGAGTTGAGAGAGACAAGGATGATCCAACGTATGTAATAACAACCTACGAAGGCATGCACGCTCACCCAAGTTCTTGCTAG 483 0.4306 MTDRNPRQADSPDSVTNQWPFELSEYLKFDDNQWLHDDQESFVSEHVSKQVYEANEERDFGGGGSYFVGSSSRDAGNGCEKKEIRERVAFKTKSEVEILDDGYKWRKYGKKMVKNSPYPRNYYRCSVDGCPVKKRVERDKDDPTYVITTYEGMHAHPSSC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1464g00018 160 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1464g00018 160 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1464g00018 160 FunFam WRKY transcription factor 57 85 159 - -
Gabi1464g00018 160 SUPERFAMILY WRKY DNA-binding domain 92 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1464g00018 160 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1464g00018 160 Gene3D WRKY domain 86 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1464g00018 160 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 158 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1464g00018 Gabi-Chr1464 93581 94705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1464g00018 21 158 WRKY Transcription Factor Family AT5G26170 54.545 8.44e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1464g00018 WRKY 6.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1464g00018 - - gmx:100796836 243.432