Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1464g00012 ATGGAGGAGATGTCGTTCGCGGTTGCAGTGCCATTAAGAGTAGGTAATTCAGTCTGTGATAACCCAACCGTAGCTACCCACATGGAGGTATCCAGATTTAAGCTGATGGCAGATGCAGGGTTGTTATCTAATTCTGTCACTGAGATTTCTACTGAGACGGTTGCAGGTTCTGATGATAGTCATAGTGGTGCCAATTTGGAGGATGAAGTTGGTATTACAGAAGTTACACCACCAAAACAGGATATGGAAGGAGAAAGTCCTTTGTCGGATATGATATCCCAAAATAGAAGCACTTTGGTTCCTGGTGATGAAGTTTTAACCCAAGAAATTGATGAGGATGATTCATTGTCATTGGAAGGTGATCAGATTATTGATAGCTCGTGTTCTCATTCAGCAGTCAGTGAGAACAGTAGTGTATATGGAGAGGAGTTCATCAGTTTTGATGCTACTTCAGATGTTGGGACACTGAGTTCCATAGACATAGAGAAGAGCATCTGTGCTGTGAATATTGTTGCCCAGGCTGCTGATTTGGGGGAGTCAAATGTTGACACAGATACTATGAGTGAGCCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGACTGGAGTTGGATCTGGCCTAAATCCTTCTACGGCAGTTCTTCAACAGCTGCCTCAGGAAAAAGGGGTGAGTGGAACACTTGCTCGGAGTGTTTTCGAATTGGATTATGCCCCACTTTGGGGATTCATATCTATGTGTGGAAGAAGACCAGAGATGGAAGATGCTGTTGCAACTGTCCCTCGATTTATGAAAATTCCTATTGAAATGCTAATTGGTGATCGGGCAGTTGATGGAATAAAAAAGTGTTTTAGTCAGCAGACAACTCATTTCTTTGGAGTCTATGATGGCCACGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCATTTGGCCTTGGCTGAGGAAATAGAACTTGTCAAGGAAGGTCTAATTAGTCGAAGTATCAATGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAATTAATAATGAACCTGTTGCCCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCTGTTATCTGTTCATCTCATATTATAGTTGCAAATTGCGGTGATTCAAGAGCGGTTCTATGTCGCGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATACAATGGAATGGCCATCGAGTATTTGGTGTTCTTGCAATGTCAAGGTCCATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACGTTTCTTGCTCGTGCGAAAGATGATGAATGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACGAACGAAGAGGTGTGTGACCTAGCTCGGAGACGAATACTTCTCTGGCACAAGAAAAATGGCATGGAACTACCCTCAGAAAGAGGAGAGGGTATTGATCCTGCTTCACAAGCAGCAGCAGAGTTCCTAGCAAACCGTGCTCTCCAGAAAGGAAGCAAAGATAACATCACTGTTATTGTGGTTGATTTGAAACCTCAAAGAAAATTTAAGACCAAGACATGA 1662 0.4326 MEEMSFAVAVPLRVGNSVCDNPTVATHMEVSRFKLMADAGLLSNSVTEISTETVAGSDDSHSGANLEDEVGITEVTPPKQDMEGESPLSDMISQNRSTLVPGDEVLTQEIDEDDSLSLEGDQIIDSSCSHSAVSENSSVYGEEFISFDATSDVGTLSSIDIEKSICAVNIVAQAADLGESNVDTDTMSEPLAVAVSLEEETGVGSGLNPSTAVLQQLPQEKGVSGTLARSVFELDYAPLWGFISMCGRRPEMEDAVATVPRFMKIPIEMLIGDRAVDGIKKCFSQQTTHFFGVYDGHGGSQVAKYCRDRIHLALAEEIELVKEGLISRSINDGCQDQWKKAFTNCFLKVDAEVGGKINNEPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLARAKDDECLILASDGLWDVMTNEEVCDLARRRILLWHKKNGMELPSERGEGIDPASQAAAEFLANRALQKGSKDNITVIVVDLKPQRKFKTKT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1464g00012 553 Gene3D - 226 553 IPR036457 -
Gabi1464g00012 553 PANTHER PROTEIN PHOSPHATASE 187 543 IPR015655 GO:0004722|GO:0006470
Gabi1464g00012 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Gabi1464g00012 553 CDD PP2Cc 244 543 IPR001932 -
Gabi1464g00012 553 SUPERFAMILY PP2C-like 233 545 IPR036457 -
Gabi1464g00012 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Gabi1464g00012 553 FunFam Protein phosphatase 2C 16 227 553 - -
Gabi1464g00012 553 MobiDBLite consensus disorder prediction 52 89 - -
Gabi1464g00012 553 SMART PP2C_4 225 541 IPR001932 -
Gabi1464g00012 553 Pfam Protein phosphatase 2C 265 536 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1464g00012 Gabi-Chr1464 67181 72379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1464g00012 1 553 PP2C-type Phosphatase Gene Family AT1G17550 47.611 2.62e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1464g00012 K14497 - gmx:100805281 907.516