Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1464g00010 ATGCCACACTTCACATTCCAAGATCCTTTTCAATCAGAAAAGCAGGGATTTTCAATGGAGGAGATGTCGTTCGCGGTTGCAGTGCCATTAAGAGTAGGTAATTCAGTCTGTGATAACCCAACCGTAGCTACCCACATGGAGGTATCCAGATTTAAGCTGATGGCAGATGCAGGGTTGTTATCTAATTCTGTCACTGAGATTTCTACTGAGACGGTTGCAGGTTCTGATGATAGTCATAGTGGTGCCAATTTGGAGGATGAAGTTGGTATTACAGAAGTTACACCACCAAAACAGGATATGGAAGGAGAAAGTCCTTTGTCGGATATGATATCCCAAAATAGAAGCACTTTGGTTCCTGGTGATGAAGTTTTAACCCAAGAAATTGATGAGGATGATTCATTGTCATTGGAAGGTGATCAGATTATTGATAGCTCGTGTTCTCATTCAGCAGTCAGTGAGAACAGTAGTGTATATGGAGAGGAGTTCATCAGTTTTGATGCTACTTCAGATGTTGGGACACTGAGTTCCATAGACATAGAGAAGAGCATCTGTGCTGTGAATATTGTTGCCCAGGCTGCTGATTTGGGGGAGTCAAATGTTGACACAGATACTATGAGTGAGCCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGACTGGAGTTGGATCTGGCCTAAATCCTTCTACGGCAGTTCTTCAACAGCTGCCTCAGGAAAAAGGGGTGAGTGGAACACTTGCTCGGAGTGTTTTCGAATTGGATTATGCCCCACTTTGGGGATTCATATCTATGTGTGGAAGAAGACCAGAGATGGAAGATGCTGTTGCAACTGTCCCTCGATTTATGAAAATTCCTATTGAAATGCTAATTGGTGATCGGGCAGTTGATGGAATAAAAAAGTGTTTTAGTCAGCAGACAACTCATTTCTTTGGAGTCTATGATGGCCACGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCATTTGGCCTTGGCTGAGGAAATAGAACTTGTCAAGGAAGGTCTAATTAGTCGAAGTATCAATGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAATTAATAATGAACCTGTTGCCCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCTGTTATCTGTTCATCTCATATTATAGTTGCAAATTGCGGTGATTCAAGAGCGGTTCTATGTCGCGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATACAATGGAATGGCCATCGAGTATTTGGTGTTCTTGCAATGTCAAGGTCCATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACGTTTCTTGCTCGTGCGAAAGATGATGAATGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACGAACGAAGAGGTGTGTGACCTAGCTCGGAGACGAATACTTCTCTGGCACAAGAAAAATGGCATGGAACTACCCTCAGAAAGAGGAGAGGGTATTGATCCTGCTTCACAAGCAGCAGCAGAGTTCCTAGCAAACCGTGCTCTCCAGAAAGGAAGCAAAGATAACATCACTGTTATTGTGGTTGATTTGAAACCTCAAAGAAAATTTAAGACCAAGACATGA 1716 0.4312 MPHFTFQDPFQSEKQGFSMEEMSFAVAVPLRVGNSVCDNPTVATHMEVSRFKLMADAGLLSNSVTEISTETVAGSDDSHSGANLEDEVGITEVTPPKQDMEGESPLSDMISQNRSTLVPGDEVLTQEIDEDDSLSLEGDQIIDSSCSHSAVSENSSVYGEEFISFDATSDVGTLSSIDIEKSICAVNIVAQAADLGESNVDTDTMSEPLAVAVSLEEETGVGSGLNPSTAVLQQLPQEKGVSGTLARSVFELDYAPLWGFISMCGRRPEMEDAVATVPRFMKIPIEMLIGDRAVDGIKKCFSQQTTHFFGVYDGHGGSQVAKYCRDRIHLALAEEIELVKEGLISRSINDGCQDQWKKAFTNCFLKVDAEVGGKINNEPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLARAKDDECLILASDGLWDVMTNEEVCDLARRRILLWHKKNGMELPSERGEGIDPASQAAAEFLANRALQKGSKDNITVIVVDLKPQRKFKTKT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1464g00010 571 ProSiteProfiles PPM-type phosphatase domain profile. 257 561 IPR001932 -
Gabi1464g00010 571 PANTHER PROTEIN PHOSPHATASE 205 561 IPR015655 GO:0004722|GO:0006470
Gabi1464g00010 571 CDD PP2Cc 262 561 IPR001932 -
Gabi1464g00010 571 Gene3D - 244 571 IPR036457 -
Gabi1464g00010 571 SUPERFAMILY PP2C-like 251 563 IPR036457 -
Gabi1464g00010 571 ProSitePatterns PPM-type phosphatase domain signature. 308 316 IPR000222 GO:0043169
Gabi1464g00010 571 Pfam Protein phosphatase 2C 283 554 IPR001932 -
Gabi1464g00010 571 MobiDBLite consensus disorder prediction 70 107 - -
Gabi1464g00010 571 FunFam Protein phosphatase 2C 16 245 571 - -
Gabi1464g00010 571 SMART PP2C_4 243 559 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1464g00010 Gabi-Chr1464 67025 72379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1464g00010 19 571 PP2C-type Phosphatase Gene Family AT1G17550 47.611 3.53e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1464g00010 K14497 - gmx:100805281 907.516