Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1462g00005 ATGGATTACTATCAAATTGTAACTATTGAAGACATTGATGCAAGTGAAAGTTTAGTATGTGTAGATGATATTGTTGATTTGGAGAAAAACATGAATGAATTTAGAGAAGATGATCTGAGTGAAATCATGGCAATTCAAGATGGTGAATGCGGGGAAGATAATGCATATGAAATTGTGGGACATGTTGATACTGAATTAATGAAGACCCCTATTTTAACTAGAGTTTTTGAGACATCAAAAGAAGCGTATGCTTTTTATAATGCTTACGCAAAAGGTAAGGGGTTCGGAATACGTAAGCAATACCATAACAAGAATGCAATTACCAAACAAGTATATAGGTGGAATTATGTGTGCTCAAAGCAAGGTGTCAAGAGACTAGATGATAAAAGAGTTGATGTTGACAATGTCAAAAGGCGAAGGGATTCAAGGACTAATTGTTTGGCGATGTTACAAGTAAAGTTGGTGGATGGCCTATGGAAAGTGAAGAAATTCAATGATACACACAATCATCCATTGATTAACACTCCAATAAAGGTGAAGAAGTTTCTTTCTCAGAATGAATTTAGACGCTCGGATTTGACAAAATCTGTTGTTTCTAAGCTTTATCAAGAGGGTTTAACATCTTCAAAAATCTCAAAGGTTGTGAGTGCTATGGACAAAGAGGTGAACCTTACTCCTGTTCAAATAAACAATATTATATCTAGCCAACGGAGGAATAATGTGGGGCGAGAATGTCAGGGAATCATCAAACACTTTCAGAGGAAGTTCATGGTTGATGGAGCTTTTTATTTTGATATGCATTTGGCAGAAGATGGAACGCTAAGAAGCATATTCTGGGCAGATGGTAGGTCAAGAGCTGCATACGCTTATTTTGGTGAAGTCCTTGTATTTGACGTGACTTACAAAACAAACAAATTCAAGTTTCCTTTTGTCCCCTTTTGTGGGGGTTAA 951 0.3638 MDYYQIVTIEDIDASESLVCVDDIVDLEKNMNEFREDDLSEIMAIQDGECGEDNAYEIVGHVDTELMKTPILTRVFETSKEAYAFYNAYAKGKGFGIRKQYHNKNAITKQVYRWNYVCSKQGVKRLDDKRVDVDNVKRRRDSRTNCLAMLQVKLVDGLWKVKKFNDTHNHPLINTPIKVKKFLSQNEFRRSDLTKSVVSKLYQEGLTSSKISKVVSAMDKEVNLTPVQINNIISSQRRNNVGRECQGIIKHFQRKFMVDGAFYFDMHLAEDGTLRSIFWADGRSRAAYAYFGEVLVFDVTYKTNKFKFPFVPFCGG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1462g00005 316 PANTHER OS01G0519700 PROTEIN 68 303 - -
Gabi1462g00005 316 Pfam FAR1 DNA-binding domain 85 173 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1462g00005 Gabi-Chr1462 42878 43828 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1462g00005 FAR1 3.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1462g00005 - - ecad:122594423 226.098