Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1457g00012 ATGAGTGAAAGTGTAGTATCTTTAGATGACATTGTTGAATTGGAGAAAGAGAGTGATGAGATAAGCGGAGATTGTCAGTGTGAAATTAGGAATCAAGACAAAGATGATGATTGTACGCAAGACAATTGCCAAGAAATTATGGGAGATGATAGTGAGTTTAATGAGCCTCCTATATTGGGTATAGTTTTTGAGACATCAGAAGAAGCCTACGAGTTTTATAATGATTTTGCAAAAGTTAAAAGGTTCAGAATATGTAAGCGTTACTTTAGCAGGAGTAGAAGAACACAACAACCATGTTTGTGGAATTATGTGTGCTCAAGGCAAGGTGTCAAGAATCTAAATGATAAAAGAGTTGATATTAGTAATATCAAAAGGCAAAGGGACACAAGGACTGATTGTTTGGCGATGTTCCAATTAAAGTTGGTGAATGGATTATGGAAAGTAGAGAAGTTCAATGATTCACATAATCATCCATTGATTAACACTCCGTCAAAGGTGAACAAGTTTCCTTCTCATAATGATTTATGTCGCTCTAATTTTACTAGATCCATTGTTTCTAAACTTTATGAGGAGGGTTTAACTTCTTCAAAAATCTCAAAGGTGGTGAATGCTATGAACAAAGAAGTTAACATCACTCCGGGTCAAATTAGCACTATTATATCAAGCCAGCGTAAGAATAATGTAGGACAAGAATGTCAGGGCATCATTAAACACTTCCAAAAGAAGTCTATTCACGATGGATGTTTTTATTTCGATATGCAGTTGGCAGAAGATGGTACATTAAGAAGTGTCTTTTGGGCGGATAAGGATGAAACAGAGGCAACCTTTACTTGGTTGTTTGAACAGTTTCGGATATGCATGTTTGATAAGTCTCCAGTTGCGATTATTACTGATCAAGATAAAGCAATGGGGAAAGCAATTGCTAAGATATTTCCAAAAGCACGACATCGTTTTTGTGCATGGCACATCAAAAAACATGTTTTAGAGCATAGTCAAGCATTACGTGCACAATTCAAAGATAGTTTTGATGTTGACTTTGTATAA 1044 0.3563 MSESVVSLDDIVELEKESDEISGDCQCEIRNQDKDDDCTQDNCQEIMGDDSEFNEPPILGIVFETSEEAYEFYNDFAKVKRFRICKRYFSRSRRTQQPCLWNYVCSRQGVKNLNDKRVDISNIKRQRDTRTDCLAMFQLKLVNGLWKVEKFNDSHNHPLINTPSKVNKFPSHNDLCRSNFTRSIVSKLYEEGLTSSKISKVVNAMNKEVNITPGQISTIISSQRKNNVGQECQGIIKHFQKKSIHDGCFYFDMQLAEDGTLRSVFWADKDETEATFTWLFEQFRICMFDKSPVAIITDQDKAMGKAIAKIFPKARHRFCAWHIKKHVLEHSQALRAQFKDSFDVDFV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1457g00012 347 Pfam FAR1 DNA-binding domain 71 160 IPR004330 -
Gabi1457g00012 347 Pfam MULE transposase domain 269 325 IPR018289 -
Gabi1457g00012 347 PANTHER OS01G0519700 PROTEIN 47 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1457g00012 Gabi-Chr1457 157133 158322 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1457g00012 FAR1 5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1457g00012 - - lsv:111887959 236.884