Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1453g00014 ATGGTGTGGAAAATGATCCAGAAAAAGATGGAATGTGTTGAAGTAATAGTCTTGAAGGAACCAATTCATCATTTATGGGCACATGGTGAAACAATTTTTGCAATTACTGAAAGCCAGGGAATAAAGCTAATTAAAGAATCAAGAGTGATAGGAGATATTATCAAAGGTAAGGAAGCAAAGTGCATGGCAGTGGCTCAGGGAAAGTTATACATTGGCTGCACAGATTCAAGCATACAGATTGAGGACCAGGGTTTGAGCAGCAGCTTTTTTCCTTTCATAGTTGTGGAGGAGGATGTTTGCTCTGAAATCTGTGTACTTGAGCCTTTACTGGAATTAAGTGATACTGATCAAGACATTGAAGGAAATGGAAAAATTAAAGCCAAAAATCAAGCCATGGAGTTCTCTGTGGACCATGATTGGTGTGCAGTAGTTAAAATACTACTGAACCTCCTGCTTGATGAAACTTTTTGTTGTATAAGGGAAAGGAATTGTTGTATGTTTTTGTATTTTATGATTGTTGTTTATAAGAAGCTATTGTATTTTTTGAGGCACATTTTTGTCCTGTTTATCTAA 573 0.363 MVWKMIQKKMECVEVIVLKEPIHHLWAHGETIFAITESQGIKLIKESRVIGDIIKGKEAKCMAVAQGKLYIGCTDSSIQIEDQGLSSSFFPFIVVEEDVCSEICVLEPLLELSDTDQDIEGNGKIKAKNQAMEFSVDHDWCAVVKILLNLLLDETFCCIRERNCCMFLYFMIVVYKKLLYFLRHIFVLFI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1453g00014 190 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1453g00014 Gabi-Chr1453 197170 198712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1453g00014 78 153 SBP-box Gene Family AT2G47070 41.584 1.15e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1453g00014 - - gmx:100789287 134.035