Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1449g00014 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGGTGTGTACCGAAAATCTGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGTTCCTCCGGCGGTGCGTACGTTAAGGGTGGCGGCGGCGCCGGGCCTTCACCGTCACTCTCCTCTAGCCGGAGTTTTCACAAGAAGTCTAATAATAATGCACACGGTGGGCAATCTAGGGTAAACCCTACCCCAGTGAATTCAGCTGAGTCTAATAGTGCTTCTGCAGCCCGGACAATACCGAATGGTTCACATGTACAGCCTCAATTTCATGGAGGATCCGATGCACCGGTTACAAATGCAATTGCCAAACCTTCTGAATCATCAGCTGCACAGAGGAGCACCAGAATTGTTCCAAAAGCTCCTACTTCTCAACCTCCTGCCGTGAGTTCTGATCCAGCAGCTCCTACAACCCCTGCTAAGGCCCCAGGAGATGCATCCAAGACGTTCCCTTTCCAATTTGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCTGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCGTCATGATTCTTTTAGACCCGTGCCTTCGGTGCCAACAGCTCCTGTTCCAAAGCAGCAGCCAGTGCCAATACGTCCTGCTCCAAAGCAGCAGCCAGTGAGGAAGGATACAGGTGCCGCTGATCAATCTAACCCTGGGGAGACTCATACAGGGTCTAGGGCAAAAAAGGATACTCAGGCATCCACTTTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTTATTCCTCTAACTGGAATTTCAATGGCAATGCCATATCACCAGTCACAGACATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCACAAGGAATGTCAATGGCATCTCTTCAGGTGCCTTTATCAATTGGAAATGCTGCACAAGTGCCACATCAGGTTTATGTTCCAAATCTTCAACCTCATCCTATGCATCCTCAAGGAATCATGCATCAAGGCCAAAACATGGGTTTCACTCCTCAAATGGCTCCTCAATTGCCCCATCAGTTAGGCAACATGGGTATTGGCATCAACCCACAATATCCCCCGCAGCAAGGAGGAAAATTTGCTGTTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGATACGCATGAAGAGCTTAGACTTGATAAAAGGGCAGATTCTGGCGTGCCTTCTCAATCTCAGCCTGTCCAGACATATGCAGCTTCTCATGCTATTAAGTACTATCCATCAAGTTCCTCCAGTACCAGTTCAGTCTTTTATCCAACTCCTAGCTCTCTTCCATTAACAAGTAGCCAGATAACTCCCAACTCTCAGCCGCCTAGATTTAATTATGCAATGAGCCATGGTCCGCAAAATGTTGGTTTCATTAATTCATCGTCTCACAGTTCCCTGCCTGTTAATAAAGCTAGCACTCCTATTCTTGAACAGCCTCATCCGGAATTTTCCCGCAATACATATCATGCATTCTCATCAGCTCCATCAGCGGTAACTTCTGTGTCTATTAAGCCAAATGGTGGGTCTGGTATTGTGGACTCATCATTTGTGAATTCCAGTATTTCTGGTGCTCAAAAGAGTGAATCTCCTACTTTTGCAGTAGCATCTGGTGATACTAGCTCTTCAGTGCCAACAAAAGGGTCTGAAACTTGTTCTGAAATCTCTACACAACACTCTAAGTTGTCCAGTGATCCTTCAGTTTTGAGCTCATTGCCAAAAGTATCTGTCGCATCTGGTGAGAAGCTTATGTCAATTTCCTTGTTGCCTTCTACATCTGCTGTGAGTGAGGATTCTGTTTCAGTTATGTCTGATAACGAAGGCAGAAAGAAGGAATCTCTTAGTAGGTCAAATTCTTCGAAGGATAATCAGAAGAAACTACAGAAGAAAGGCCAGTCACAGCATCAGGTTACTGCACAATCTCCTGCTGTGGCTAATGTGCCTTCCCAAGCTGTTGATGGTGGTGTCTCTGATAGTGGAATTTCTGAAACTGTAGGAACTAAGACAAACTATTCTGTAGCAATCACCAGTGAAGATCTCTCAGCAGCAGCTTCAGTCACATTATCAACTACCAATGGGAGCATACCTTGTGCTTCTGAAGTGAAGACCAATGGTTCTACACAAGTTTCTGCTTGTGCTTCAGCTGAAGGAATTACTCAAGCTGTGGATAGTTTGAACAATCATAAGAATGATGAGCTATATGAATTATCACAACAGGATAAACTGTTAAAGCAGAATATTTTGGAAATTGATGGTAAAACTGAAATTTCATCTCTTCAAGGATGTAAACAAAATATTAGTGATGGTGGAACAGACTTCAAACAACCTAAGCAAGGCGCTGCAAATTTAAGCACTGAGGCTGTAACCTTGAGGACTGTACAGCGAGGACCGGATGAATCTACAAGTTGTAGTGCAGAATGTGACAGGATGGCCGGTAATTTAGGCATGTCTGCATTGGAATCTGGAAATTTCTCTTTAAATAGAAATGATGTAGTTAGTAATGAAGCTGTTTCTACAAATTCTGGCCCATCAGATCAGCAGTCTGTTGATCTTCCAGAAACAACTTTAAAACATTGCCAGGATAGTTCAGAGAATGCTGCTAGTGGCTCAGTGTTTCTTCCAGCGTCAGGTACCAAGGACAGACCAATAGAGCCAAGTAAGGTGAAAACTACATCAAAGGGGAAAAAGAAACTAAAAGAGATTCTTCAGAAAGCAGATGCTTCTGGGTCAACATCTGATCTTTATAATGCATATAAGGGACCTGGCGAAAAGAAAGAAGCTGTTGTAATTTCAGAGAAAACAGAAAGTGCTTCTACTTCTGGAAATCTGGAGCAGTTGCCTACGGATGCTGCTCAGCCAGATGTTTTAGCAACTGAGCAATGTGGGCAGAGTAAAGCTGAACTTGATGACTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTTCGGATAAAAGTCAACCAGCTAGTGATGGAAGTGAAGTTACTGCCAAAAAGTACTCCCGAGATTTCCTTTTGAAATTTGCAGAGCAATGTACTGATCTTCCTGAAGGGTTTGAAATCACGGCAGATGTTGCTGAGGCTTTGATGAGTCCTCATGTTGTTGAACATGATTCACATCCTTCTACTGGAAGAATTATAGATAGGCCGGGTGGGATGCTTCGGATGGATCGTCGTGGGAGTGGTGTTATCGAGGAAGACAAATGGAGTAAAGCTGCTGGTGCTTATAATTCCAGTATGCGCATGGATAGTATTGGAGGTAATGCAGGATTTCGACCGGCCCAAGGAGGCAATTTTGGTGTTCTAAGAAATCCACGCATGCAAACACCTCTGCAGTATGCTGGGGGGATTCTTTCTGGGCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAGTAGCCTTGATGGTGAAAGGTGGTTGCGTTCTCCAAGCTTCCAGCACAGGGGTTTAATTCCATCTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACAGATGAGGAACAGGCTAAGCAGAGGCAGTTAAAAGCTATTTTGAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTCACTCTCACTGGTGTCATATCACAAATATTCGAGAAAGCCTTGATGGAGCCCACCTTCTGTGAAATGTATGCCGATTTCTGTTTACATCTGGCAGATGAGCTGCCTGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAAAGATTATTATTAAACAAGTGCCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTCAAGCAGTCTGATGAGCAAAGAGAACAGAAACGAACCAAGGCTAGAAGACGCATGTTGGGTAATATCAGATTGATTGGAGAACTTTATAAGAAGAGAATGTTGACAGAGAGAATAATGCATGAATGCATCAAGAAGTTATTGGGGCAGCATCAGGATCCTGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACCATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACACATGGATGTATATTTTGAAAGGATGAGATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGAAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTTCCCAAGAGAGGCAGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATCCAGCAAGAAGGATCCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTTCTCCTAATTCTCAGATGGGTGGACTTCGTGGGTTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGCTCGCATGGATGAAAGGCAATCTTATGAGCCTAGGACATTGTCAGTTCCCTTGCCTCAAAGGCCTTTAGGTGATGATTCAATAACATTGGGACCCCAGGGTGGTCTTGCTAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTATCAGAGCGCACTCCATACAGCTTTAGGGATGACCTTGCATCAAGATATGCTCCGGATAGATTTGCTGGTCCAACTGCTTATGATCAATCAAGTGCTCAAGAGCGTAACATGAATTATGGTAGCAGGGAATTGAGGCATGCAGATAGGATTCTTGATAAACCTGTTGTAACTTCACCTACTGCTCGAGTGCAAGGGACAGCAGTCTCCCGGAACCCTTCTTCAGAGAAGGGTTGGCCAGAAGAGCGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAACGAAGTTGTTTTATGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCGTTTGAGAGAAAGGAGACAGAGAGAGATCTTTTGGCCCAACTGCTAGTCAACCTTGTGAAGTCTCACGATGGCACCTTGAGTTCAGCCCATCTCATCGAAGGGTTTGAATCTGTTCTCAGCACTTTGGAAGATGCGGATTATGCCCCCAAAGCAGCAGAATTTCTTGGCCGTATTTTTGCCAAAGCGATAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCGGTTGATATATGATGGTGGAGAGGAACCTGGCAAGCTCTTACAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATCAAAATGGATAAGGGTGATGCTGTTTTCATTGAGATCTGCGCAAGCTCCGGCTTGCTATTGGAGACTTTCCGGCCACCGCATCCGATCACATCAAAGAAGTTAGAGAAATTTCTTTAG 5493 0.4435 MSFNQSKSDKSDGVYRKSGRSASFNQQRGSSGGAYVKGGGGAGPSPSLSSSRSFHKKSNNNAHGGQSRVNPTPVNSAESNSASAARTIPNGSHVQPQFHGGSDAPVTNAIAKPSESSAAQRSTRIVPKAPTSQPPAVSSDPAAPTTPAKAPGDASKTFPFQFGSISPGFMNGMAIPARTSSAPPNLDEQKRDQARHDSFRPVPSVPTAPVPKQQPVPIRPAPKQQPVRKDTGAADQSNPGETHTGSRAKKDTQASTLPPASQMQKPSVIPLTGISMAMPYHQSQTSVHFGGPNPQIQSQGMSMASLQVPLSIGNAAQVPHQVYVPNLQPHPMHPQGIMHQGQNMGFTPQMAPQLPHQLGNMGIGINPQYPPQQGGKFAVPRKTTPVKITHPDTHEELRLDKRADSGVPSQSQPVQTYAASHAIKYYPSSSSSTSSVFYPTPSSLPLTSSQITPNSQPPRFNYAMSHGPQNVGFINSSSHSSLPVNKASTPILEQPHPEFSRNTYHAFSSAPSAVTSVSIKPNGGSGIVDSSFVNSSISGAQKSESPTFAVASGDTSSSVPTKGSETCSEISTQHSKLSSDPSVLSSLPKVSVASGEKLMSISLLPSTSAVSEDSVSVMSDNEGRKKESLSRSNSSKDNQKKLQKKGQSQHQVTAQSPAVANVPSQAVDGGVSDSGISETVGTKTNYSVAITSEDLSAAASVTLSTTNGSIPCASEVKTNGSTQVSACASAEGITQAVDSLNNHKNDELYELSQQDKLLKQNILEIDGKTEISSLQGCKQNISDGGTDFKQPKQGAANLSTEAVTLRTVQRGPDESTSCSAECDRMAGNLGMSALESGNFSLNRNDVVSNEAVSTNSGPSDQQSVDLPETTLKHCQDSSENAASGSVFLPASGTKDRPIEPSKVKTTSKGKKKLKEILQKADASGSTSDLYNAYKGPGEKKEAVVISEKTESASTSGNLEQLPTDAAQPDVLATEQCGQSKAELDDWEDAADMSTPKLEVSDKSQPASDGSEVTAKKYSRDFLLKFAEQCTDLPEGFEITADVAEALMSPHVVEHDSHPSTGRIIDRPGGMLRMDRRGSGVIEEDKWSKAAGAYNSSMRMDSIGGNAGFRPAQGGNFGVLRNPRMQTPLQYAGGILSGPMQSMVNQGGMQRSSLDGERWLRSPSFQHRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYADFCLHLADELPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEQREQKRTKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFERMRLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDASQERQAQASRLGRGPGNNPARRIPMDFGPRGSSMLSSPNSQMGGLRGLPTQVRGYGSQDARMDERQSYEPRTLSVPLPQRPLGDDSITLGPQGGLARGMSIRGPPAVSSSTGLNGYNNLSERTPYSFRDDLASRYAPDRFAGPTAYDQSSAQERNMNYGSRELRHADRILDKPVVTSPTARVQGTAVSRNPSSEKGWPEERLQDMSMAAIREYYSARDVNEVVLCVKDLNSPSFHPSMVSLWVTDSFERKETERDLLAQLLVNLVKSHDGTLSSAHLIEGFESVLSTLEDADYAPKAAEFLGRIFAKAITEHVVSLKEIGRLIYDGGEEPGKLLQVGLAADVLGSTLEVIKMDKGDAVFIEICASSGLLLETFRPPHPITSKKLEKFL 1830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1422 1446 - -
Gabi1449g00014 1830 FunFam Eukaryotic translation initiation factor 4G 1200 1435 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1 265 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 897 918 - -
Gabi1449g00014 1830 FunFam Eukaryotic translation initiation factor 4G 1637 1829 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 204 222 - -
Gabi1449g00014 1830 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 357 1830 IPR045208 GO:0003743
Gabi1449g00014 1830 Gene3D - 1637 1830 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 618 644 - -
Gabi1449g00014 1830 Pfam MIF4G domain 1200 1422 IPR003890 GO:0003723|GO:0005515
Gabi1449g00014 1830 Coils Coil 1282 1302 - -
Gabi1449g00014 1830 Gene3D - 1200 1435 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 109 139 - -
Gabi1449g00014 1830 SMART if4_15 1200 1422 IPR003890 GO:0003723|GO:0005515
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1291 1319 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 874 969 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 543 566 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 947 962 - -
Gabi1449g00014 1830 SUPERFAMILY ARM repeat 1637 1825 IPR016024 -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 18 32 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1474 1488 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 609 678 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1620 1634 - -
Gabi1449g00014 1830 ProSiteProfiles MI domain profile. 1643 1766 IPR003891 -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 230 265 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 645 678 - -
Gabi1449g00014 1830 SMART ma3_7 1644 1757 IPR003891 -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1422 1526 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1291 1321 - -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 44 97 - -
Gabi1449g00014 1830 Pfam MA3 domain 1650 1755 IPR003891 -
Gabi1449g00014 1830 MobiDBLite consensus disorder prediction 1619 1640 - -
Gabi1449g00014 1830 SUPERFAMILY ARM repeat 1194 1424 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1449g00014 Gabi-Chr1449 192221 205041 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1449g00014 1 1829 Eukaryotic Initiation Factors Gene Family AT3G60240 45.781 0.0 1282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1449g00014 K03260 - gmx:100796636 2670.96