Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1439g00016 ATGGAGGGCTCAAAGGAAAACCATCTCGCTCCGTCTCCATCGATCATGCCCTCCTCAAATCTTCAAGGCGATTCAAGAATGAAGGGTGTCAAGCTCGTGAAGGAGACGGCACTCCATCACCGGCTGCCTCTCAGCAACATCAATCAGAATATTATGGATAACAAAAAGCCCTGTGTTGTCAGCAAAGTAGATCTTTCCTGGAAGTGTACAGCACAGACTGTTCAGCACTACCCTCAAGAAACTAAGAAACAGAATCCGTTGGCCCTGACCCCCTGTTACCACTTAGATTCTGCCATCGTAGAGATTGATGAATACGAGGATGCCAGTGATAATGCAGTTCCAATATTTGTGAAGCACACTGAAGCAATGTTGGACGAAATTGACAGAATTGAGGAAATTGAAATGGAAGATATGGACGAACCTGTTATGGATATCGACGCCTGTGATAGGAATGATCCACTTGCAGTTGTTGAGTACATAGATGATATCTACTGTTTTTATAGGAAAACTGAGAATTCTAGCCGCGCCTCTTCAAATTACTTGAGTAGTCAGTTTGACATTAAAGAGAAGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCATGGAGCGTCAAGCTGTGATCAGAAAAAAGCTTCAGTTGGTCGGTGTAACAGCCATGCTAATAGCTTGTAAGTATGAGGAGGTCTCAGTCCCCACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAAATGAAGTTTTAAAAATGGAGAAGTTAATGGTGAACATCTTGCAATTCAATTTGTCTGTTCCTACTCCATACGTGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGACAAAAAGCTGGAGCTCTTGTCCTCCTTCTTGATCGAGCTTTGCTTGGTGGAATACAAAATGCTAGAGTTTTCGCCATCTTTGCTAGCTGCTGCAGCCGTTTACACAGCTCAATGTAGTCTGTATCAGTTTAAGCAATGGACTAAGACCAGCGAGTGGTATACTGAATACTCCGAAGAGAAGCTCCTAGAATGCTCAAGGCTGATGGTTACTTTCCATCGGAAAGCTGGATCAGGGAAACTTACAGGAGTATATAGGAAGTACAGTACGTGGAAGTATGGTTGTGCAGCAAAAATAGAACCAGCCCTGTTTCTACTGGACAGTAATTAA 1245 0.4257 MEGSKENHLAPSPSIMPSSNLQGDSRMKGVKLVKETALHHRLPLSNINQNIMDNKKPCVVSKVDLSWKCTAQTVQHYPQETKKQNPLALTPCYHLDSAIVEIDEYEDASDNAVPIFVKHTEAMLDEIDRIEEIEMEDMDEPVMDIDACDRNDPLAVVEYIDDIYCFYRKTENSSRASSNYLSSQFDIKEKMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFMERQAVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLKMEKLMVNILQFNLSVPTPYVFMRRFLKAAHSDKKLELLSSFLIELCLVEYKMLEFSPSLLAAAAVYTAQCSLYQFKQWTKTSEWYTEYSEEKLLECSRLMVTFHRKAGSGKLTGVYRKYSTWKYGCAAKIEPALFLLDSN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1439g00016 414 FunFam G2/mitotic-specific cyclin-1 277 402 - -
Gabi1439g00016 414 SUPERFAMILY Cyclin-like 289 406 IPR036915 -
Gabi1439g00016 414 CDD CYCLIN_AtCycB-like_rpt2 290 406 - -
Gabi1439g00016 414 PANTHER CYCLINS 116 395 IPR039361 -
Gabi1439g00016 414 ProSitePatterns Cyclins signature. 192 223 IPR006671 -
Gabi1439g00016 414 CDD CYCLIN_AtCycB-like_rpt1 141 285 - -
Gabi1439g00016 414 MobiDBLite consensus disorder prediction 1 26 - -
Gabi1439g00016 414 MobiDBLite consensus disorder prediction 11 25 - -
Gabi1439g00016 414 Pfam Cyclin, N-terminal domain 162 288 IPR006671 -
Gabi1439g00016 414 SUPERFAMILY Cyclin-like 151 287 IPR036915 -
Gabi1439g00016 414 SMART cyclin_7 294 376 IPR013763 -
Gabi1439g00016 414 SMART cyclin_7 197 281 IPR013763 -
Gabi1439g00016 414 Pfam Cyclin, C-terminal domain 290 406 IPR004367 -
Gabi1439g00016 414 Gene3D - 162 403 - -
Gabi1439g00016 414 Gene3D - 176 288 - -
Gabi1439g00016 414 SMART Cyclin_C_2 290 407 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1439g00016 Gabi-Chr1439 153216 155913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1439g00016 1 411 Core Cell Cycle Gene Families AT1G20610 54.233 2.79e-156 446