Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1438g00007 ATGCCTGGGAATAAGTATAACGGTAGTTCCAACCATATACCAGGTCGTATTGAACGACTTTTAAGAGATAGAGAGTTAAGAAAAAGCAGCAGAATATCTGAGTCCATTGAGAATAATAATAATAATAGTAATAATAATAATAATAGGGTTACTGAACTTTATGAGCATGACCAGCGCTTAAGAGAAGATGAAAACAACTTAGATGATGTTGAACGGTTACTGGAAGGGGTTGCAGCAACAAGGTTGTGTAGTGAGGGATATGAAAGGAAAGATGGGAAGCCTTTTAGACAAAGGCTTTTGGTTGTGGCTAACAGGTTGCCAGTTTCAGCTAATAGGAAAGGTGAGGATTCTTGGTCTTTGGAGATGAGTTCTGGTGGATTAGTGACCGCTCTTTTAGGTAAGTGGTTTAAGACACTTACTGAAGCATTGGCTGAAAAGAGGTGTATACCTGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGGTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCCACCACACGCAGTTTCCAGTCTCAGTATGCAGCGTATGAGAAAGCAAACCAAATGTTTGCTGATGTTGTGAACAAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTAAAGAAATATAACAACAATATGAAAGTCGGATGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAGGACACTGCCGTCTCGTTCAGAGATCCTGCATTCCGTTCTTGCAGCTGACTTAGTTGGTTTTCACACCTACGATTATGCTAGACATTTTGTTAGTGCTTGTACTCGTATCCTTGGACTTGAGGGTACACCTGATGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCACTTGACCTTCCACCAGTACAGGAACACATCAAAGAATTACTAGGAAGATTTGAAGGCAGAAAGGTAATGTTAGGCGTTGATCGCCTTGACATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAAATGCTTATTGGCGTGATAAAGTCGTTTTGCTTCAAATCGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGAATCAATGGCAGATTTGGATCATTGACTGCTGTTCCTATACATCACCTGGATCGCTCTCTTGACTTCCATGCACTATGTGCTTTATATGCTGTTACGGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAGTCTCTCGGTGCTGGGGCAATTCTTGTCAACCCTTGGAACATCACAGAAGTCGCTGATGCAATTGCCAGAGCTCTAAATATGCCATCTGTGGAAAGAGAAAAGAGACACAAGCATAATTTTCTTCATGTAAAATCCCACACTGCTCAAGAATGGGCAGGAACTTTTGTAAGCGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAAACAAGTTCCGCCCCGGCTTCCAACCAAGACTGCAATGGAACGTTTTCTGCAGTCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCAGTCGAGAAAACAGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTGAGAAAACCCTTGACAGCACTTTGCAGTGACCCAAATACCACTGTTGTTGTGCTCAGTGGAAGTAGTAGAAATGTCCTAGATAATAACTTCAAAGAATATGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACACCCTTCAAAGGGTGAATGGATGACAACAATGCCAGAACATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCAGAGAAAGAACACCTCGATCATATTTTGAAGAAAGGGAGGCTTCACTTGTATGGAATTACAAATACGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGAGACATGCTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCTTCAGTTGATGTTGTTCAAGGGAGTCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGTGCCGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGTAAATCCATGACATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTGGGGAAGGATGAAGATATTTATGCCTTTTTTGAGCCTGATCTTCCTTCTATTGGTGTGGTGTCGAATTCTGAGAAGAAAACGAGTAACCATATCTGCAATGCACCATGGCAACCAGCTCCTGAAAAGGTATCATGGAACGTCCTTGACCTTAAGAAAGAGAATTACTTCTCATGTGCTGTTGGGCGAACACGAACAAAAGCTCGGTATACACTTGGAACCTCAGATGATGTTGTTGCATTTCTGATGGAACTAGCGGATGCATCTTTGAACTCTTTACCACCGAGTTAA 2631 0.4143 MPGNKYNGSSNHIPGRIERLLRDRELRKSSRISESIENNNNNSNNNNNRVTELYEHDQRLREDENNLDDVERLLEGVAATRLCSEGYERKDGKPFRQRLLVVANRLPVSANRKGEDSWSLEMSSGGLVTALLGKWFKTLTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQYAAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKKYNNNMKVGWFLHTPFPSSEIHRTLPSRSEILHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQEHIKELLGRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVADAIARALNMPSVEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTKQVPPRLPTKTAMERFLQSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELRKPLTALCSDPNTTVVVLSGSSRNVLDNNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWVDSVKHVFEYFRERTPRSYFEEREASLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYAFFEPDLPSIGVVSNSEKKTSNHICNAPWQPAPEKVSWNVLDLKKENYFSCAVGRTRTKARYTLGTSDDVVAFLMELADASLNSLPPS 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1438g00007 876 FunFam Alpha,alpha-trehalose-phosphate synthase 600 671 - -
Gabi1438g00007 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 326 528 - -
Gabi1438g00007 876 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 666 746 - -
Gabi1438g00007 876 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 97 546 - -
Gabi1438g00007 876 CDD GT20_TPS 98 544 IPR001830 GO:0003824|GO:0005992
Gabi1438g00007 876 Gene3D - 579 789 IPR023214 -
Gabi1438g00007 876 Gene3D - 666 746 - -
Gabi1438g00007 876 Pfam Glycosyltransferase family 20 141 544 IPR001830 GO:0003824|GO:0005992
Gabi1438g00007 876 FunFam Trehalose-6-phosphatase synthase S4 712 872 - -
Gabi1438g00007 876 Pfam Trehalose-phosphatase 582 806 IPR003337 GO:0003824|GO:0005992
Gabi1438g00007 876 Gene3D Glycogen Phosphorylase B; 90 325 - -
Gabi1438g00007 876 CDD HAD_TPP 577 860 - -
Gabi1438g00007 876 NCBIfam trehalose-phosphatase 575 810 IPR003337 GO:0003824|GO:0005992
Gabi1438g00007 876 SUPERFAMILY HAD-like 576 865 IPR036412 -
Gabi1438g00007 876 Coils Coil 53 80 - -
Gabi1438g00007 876 Gene3D Glycogen Phosphorylase B; 326 529 - -
Gabi1438g00007 876 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 98 544 IPR012766 GO:0003825|GO:0005992
Gabi1438g00007 876 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 134 325 - -
Gabi1438g00007 876 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 90 867 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1438g00007 Gabi-Chr1438 58934 81138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1438g00007 1 869 Trehalose Biosynthesis Gene Families AT1G78580 73.784 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1438g00007 K16055 - gmx:100797320 1471.45