Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1436g00006 ATGGCTTCTAAGGATGGCCAAGACCCACGAATAGCAAGAATCAAATCTGCAATCAGGGTCATCCCAAACTTTCCTAAGCAAGGTAATATGTTTCAAGATATAACCACGTTACTTCTTGATACAAAAGCTTTCAAAGATACAATTGACTTGTTTGTGGAGAGGTACATAGATAAAAACATTACTGTTGTGGCAGGCCTTGAAGCAAAAGGCTTCATATTTGGCTCGCCTATTGCGTTAGCTCTTGGAGCAAAATTTGTCCCAATGAGGAAACACAATAAACTGCCAGGGGCTGTACAACCAGGAGCACGAGCCATTGTCATAGATGATCAAATTGTTACTGGGGGAAGTTTATACGCTGCATTTAAGCTACTAGAACGTGCTGGGGTGCATGTGGTTGAGTGTGCTTGCGTGATTGAATTCCCAGAGTTGAAGGGGCGGGAAAAGCTGGGCGACAAATCACTGTTTGCGTTAATTAATGCATCCTGA 486 0.43 MASKDGQDPRIARIKSAIRVIPNFPKQGNMFQDITTLLLDTKAFKDTIDLFVERYIDKNITVVAGLEAKGFIFGSPIALALGAKFVPMRKHNKLPGAVQPGARAIVIDDQIVTGGSLYAAFKLLERAGVHVVECACVIEFPELKGREKLGDKSLFALINAS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1436g00006 161 CDD PRTases_typeI 48 158 IPR000836 -
Gabi1436g00006 161 Pfam Phosphoribosyl transferase domain 39 158 IPR000836 -
Gabi1436g00006 161 SUPERFAMILY PRTase-like 14 152 IPR029057 -
Gabi1436g00006 161 Gene3D - 2 160 IPR029057 -
Gabi1436g00006 161 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 96 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1436g00006 Gabi-Chr1436 76712 81548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1436g00006 1 161 PRT Gene Family AT1G27450 65.385 7.49e-81 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1436g00006 K00759 - qsu:112027152 243.817