Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1434g00007 ATGGATCGGAGCTCCTTCTCCCCTGGGACCCGGAAAACCCGACCTAAATCCGAGATATATTCCACCTTCGTGGTCCACGACGATGAAGAAGATGACGACGGCGGAACCTACCGGCGGCGGAAATCCGGAAGCGCGGGACCACAGGACGATCCGTACGCGACAATGGTCTACAAAGACAACGGCCACGGCGTTGGCGGCGATGACGACGACGACGAAGATTCGTCTCTCCCTCCGCTCCTCAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACTACGACTACGACGATGACGACGAAAATTCCGGCGATTTTGGCACCGTGATCGTGAAGACCGATCGGAGCCGGCAGCGCGATCGGTCTTCTTCAGGATTGGCTTCACCGGCGGGGTCGACCTGGAAGGGTCGGAGTTATTCTCAGGCGAGTCCTATGAACAGGCTCGGCGGCGGCGAGGTTGATGATGAAGACGACGGAGAAGACAGCGGAGGTTTTTCAACCTTTGTTGTGCGTTCGACGGTGAGGTCCGGCGAGAGAGAGACTGTAAGCGGAACGGTGGTGCGGCGGACGAGTGGCAGCGGCGGCAGTTCGACGATGGAGAGGGCGGTGGCGAGCATGCAAGCTGTGGGAGAAGTTGGATTCGGGAAGCAGAGGAAGGGAAGTGGATCCTCGCATAACGAGGAGGGTAGGCAGCAATTAGTAACGACCAAGGTATCGTCGAGTTCGATCCCTGATAGTGTTATCAGAGAGGATCCTACGACCAAGTACGAATTGCTCAACGAACTTGGGAAGGGGTCCTATGGGGCTGTTTACAAAGCTAGGGATTTTAGAACCTCAGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCGAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGGGACTTGACTATTTGCACTCAATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTGTTGACTGAGCAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACGAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCCCATTGGATGGCTCCGGAAGTTATTCAAGAAAGTCGGTATGATGGAAAGGTAGATGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGTATGCCTCCAAGATCAGACGTGCATCCGATGAGGGTTTTATTCATGATATCCATCGAACCAGCTCCAATGCTTGAGGACAAAGAAAAATGGTCTCTGTATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAGCCTCGTCTCCGCCCTACAGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAAACTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATGAGGGCTTCAATGGCTTTGCAGGTGCAAACTCTTGCTCCAGCTGCATTGGGAGATCAGTCAACGTTAGCCTCAAAGCTAAATGACGAATATGGAGATACTGTTCCATCCAGACCTCATAACATAGGGGTTGAAGGGGCTGCTGATCTTTCGTCACATGGGACTATGAGGAAGCTGCATAAGGTGGAAGATGTGGACACAAGTGACGCAGGCAATTTTGGCACTGTAATAGTCCACGGAGATGAATTACATAAGATCACACAGGATGCAGATTCAGATTCCTTATCTGCTCTCACCAGTGACACTGGAGGCAGATTGGCTGACCCTGGGATTGAGAGTCAAAAAGTTGGTGAAACGAACACTGCCTCTTTTAGAGGATCTAGTTCTACTACAGATACCATACAATTGTCTTTACCTCGTTTAAGTAATTCAACTGAGCAGAACCTCACAACAGAAGGTAGTCATCAAGCACAAGCTGGAATTAGAAGTGATATAAGCACTAGCACACCGAAGAATGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTTTGGTCAATTTATGCTGCTGGTAATACAGTGCCCATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTGTCAGACAACGTGCTTGGTGGCATGCAACAGGATACCAGTGGAACTGGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGCCGGAGAGGATTAAATGAGCAGATGCCACTTCCTCCTAGCATTTACCAAAGATTAACATCAAGTTCTACTCTATTGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGCTGCAAGCAACGCAGGAGCAGCGGACCATTCAAAATCTCTCTGACACACTTCGAACCATTCTTCGGTTGTAG 2427 0.4899 MDRSSFSPGTRKTRPKSEIYSTFVVHDDEEDDDGGTYRRRKSGSAGPQDDPYATMVYKDNGHGVGGDDDDDEDSSLPPLLKRLPKDFGGGAPLDYDYDDDDENSGDFGTVIVKTDRSRQRDRSSSGLASPAGSTWKGRSYSQASPMNRLGGGEVDDEDDGEDSGGFSTFVVRSTVRSGERETVSGTVVRRTSGSGGSSTMERAVASMQAVGEVGFGKQRKGSGSSHNEEGRQQLVTTKVSSSSIPDSVIREDPTTKYELLNELGKGSYGAVYKARDFRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGMPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAMLPKLEKARQMRASMALQVQTLAPAALGDQSTLASKLNDEYGDTVPSRPHNIGVEGAADLSSHGTMRKLHKVEDVDTSDAGNFGTVIVHGDELHKITQDADSDSLSALTSDTGGRLADPGIESQKVGETNTASFRGSSSTTDTIQLSLPRLSNSTEQNLTTEGSHQAQAGIRSDISTSTPKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTSGTGTVEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1434g00007 808 ProSiteProfiles Protein kinase domain profile. 257 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 167 199 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 588 664 - -
Gabi1434g00007 808 SUPERFAMILY Protein kinase-like (PK-like) 254 476 IPR011009 -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 608 664 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 1 199 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 31 45 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 215 248 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 227 248 - -
Gabi1434g00007 808 Gene3D Phosphorylase Kinase; domain 1 233 328 - -
Gabi1434g00007 808 ProSitePatterns Protein kinases ATP-binding region signature. 263 286 IPR017441 GO:0005524
Gabi1434g00007 808 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 330 523 - -
Gabi1434g00007 808 Gene3D Transferase(Phosphotransferase) domain 1 329 505 - -
Gabi1434g00007 808 MobiDBLite consensus disorder prediction 123 146 - -
Gabi1434g00007 808 Pfam Protein tyrosine and serine/threonine kinase 259 326 IPR001245 GO:0004672|GO:0006468
Gabi1434g00007 808 SMART serkin_6 257 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1434g00007 808 Pfam Protein kinase domain 328 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1434g00007 Gabi-Chr1434 75552 92473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1434g00007 7 808 MAP Kinase Kinase Kinase Kinase AT1G69220 56.381 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Gabi1434g00007 Pkinase 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1434g00007 - - gmx:100804995 1228.77