Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1434g00004 ATGGATCGGAGCTCCTTCTCCCCTGGGACCCGGAAAACCCGACCTAAATCCGAGATATATTCCACCTTCGTGGTCCACGACGATGAAGAAGATGACGACGGCGGAACCTACCGGCGGCGGAAATCCGGAAGCGCGGGACCACAGGACGATCCGTACGCGACAATGGTCTACAAAGACAACGGCCACGGCGTTGGCGGCGATGACGACGACGACGAAGATTCGTCTCTCCCTCCGCTCCTCAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACTACGACTACGACGATGACGACGAAAATTCCGGCGATTTTGGCACCGTGATCGTGAAGACCGATCGGAGCCGGCAGCGCGATCGGTCTTCTTCAGGATTGGCTTCACCGGCGGGGTCGACCTGGAAGGGTCGGAGTTATTCTCAGGCGAGTCCTATGAACAGGCTCGGCGGCGGCGAGGTTGATGATGAAGACGACGGAGAAGACAGCGGAGGTTTTTCAACCTTTGTTGTGCGTTCGACGGTGAGGTCCGGCGAGAGAGAGACTGTAAGCGGAACGGTGGTGCGGCGGACGAGTGGCAGCGGCGGCAGTTCGACGATGGAGAGGGCGGTGGCGAGCATGCAAGCTGTGGGAGAAGTTGGATTCGGGAAGCAGAGGAAGGGAAGTGGATCCTCGCATAACGAGGAGGGTAGGCAGCAATTAGTAACGACCAAGGTATCGTCGAGTTCGATCCCTGATAGTGTTATCAGAGAGGATCCTACGACCAAGTACGAATTGCTCAACGAACTTGGGAAGGGGTCCTATGGGGCTGTTTACAAAGCTAGGGATTTTAGAACCTCAGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCGAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAGTACTGTGGCGGTGGAAGTGTTGCCGATCTGATGAATGTGACTGATGAATCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGACTATTTGCACTCAATTTTCAAAGTCCATAGGGACATTAAAGGTGGGAATATCTTGTTGACTGAGCAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACGAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCCCATTGGATGGCTCCGGAAGTTATTCAAGAAAGTCGGTATGATGGAAAGGTAGATGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGTATGCCTCCAAGATCAGACGTGCATCCGATGAGGGTTTTATTCATGATATCCATCGAACCAGCTCCAATGCTTGAGGACAAAGAAAAATGGTCTCTGTATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAGCCTCGTCTCCGCCCTACAGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAAACTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATGAGGGCTTCAATGGCTTTGCAGGTGCAAACTCTTGCTCCAGCTGCATTGGGAGATCAGTCAACGTTAGCCTCAAAGCTAAATGACGAATATGGAGATACTGTTCCATCCAGACCTCATAACATAGGGGTTGAAGGGGCTGCTGATCTTTCGTCACATGGGACTATGAGGAAGCTGCATAAGGTGGAAGATGTGGACACAAGTGACGCAGGCAATTTTGGCACTGTAATAGTCCACGGAGATGAATTACATAAGATCACACAGGATGCAGATTCAGATTCCTTATCTGCTCTCACCAGTGACACTGGAGGCAGATTGGCTGACCCTGGGATTGAGAGTCAAAAAGTTGGTGAAACGAACACTGCCTCTTTTAGAGGATCTAGTTCTACTACAGATACCATACAATTGTCTTTACCTCGTTTAAGTAATTCAACTGAGCAGAACCTCACAACAGAAGGTAGTCATCAAGCACAAGCTGGAATTAGAAGTGATATAAGCACTAGCACACCGAAGAATGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTTTGGTCAATTTATGCTGCTGGTAATACAGTGCCCATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTGTCAGACAACGTGCTTGGTGGCATGCAACAGGATACCAGTGGAACTGGAACAGTGGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGCCGGAGAGGATTAAATGAGCAGATGCCACTTCCTCCTAGCATTTACCAAAGATTAACATCAAGTTCTACTCTATTGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGCTGCAAGCAACGCAGGAGCAGCGGACCATTCAAAATCTCTCTGACACACTTCGAACCATTCTTCGGTTGTAG 2535 0.488 MDRSSFSPGTRKTRPKSEIYSTFVVHDDEEDDDGGTYRRRKSGSAGPQDDPYATMVYKDNGHGVGGDDDDDEDSSLPPLLKRLPKDFGGGAPLDYDYDDDDENSGDFGTVIVKTDRSRQRDRSSSGLASPAGSTWKGRSYSQASPMNRLGGGEVDDEDDGEDSGGFSTFVVRSTVRSGERETVSGTVVRRTSGSGGSSTMERAVASMQAVGEVGFGKQRKGSGSSHNEEGRQQLVTTKVSSSSIPDSVIREDPTTKYELLNELGKGSYGAVYKARDFRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDESLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGMPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAMLPKLEKARQMRASMALQVQTLAPAALGDQSTLASKLNDEYGDTVPSRPHNIGVEGAADLSSHGTMRKLHKVEDVDTSDAGNFGTVIVHGDELHKITQDADSDSLSALTSDTGGRLADPGIESQKVGETNTASFRGSSSTTDTIQLSLPRLSNSTEQNLTTEGSHQAQAGIRSDISTSTPKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTSGTGTVEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1434g00004 844 FunFam serine/threonine-protein kinase dst1 isoform X1 254 544 - -
Gabi1434g00004 844 SMART serkin_6 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1434g00004 844 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 240 559 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 167 199 - -
Gabi1434g00004 844 Gene3D Transferase(Phosphotransferase) domain 1 253 543 - -
Gabi1434g00004 844 Pfam Protein kinase domain 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 1 199 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 624 700 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 31 45 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 215 248 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 227 248 - -
Gabi1434g00004 844 SUPERFAMILY Protein kinase-like (PK-like) 254 512 IPR011009 -
Gabi1434g00004 844 ProSitePatterns Protein kinases ATP-binding region signature. 263 286 IPR017441 GO:0005524
Gabi1434g00004 844 FunFam Aurora kinase A 250 338 - -
Gabi1434g00004 844 CDD STKc_MAP4K3_like 256 511 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 644 700 - -
Gabi1434g00004 844 MobiDBLite consensus disorder prediction 123 146 - -
Gabi1434g00004 844 ProSiteProfiles Protein kinase domain profile. 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1434g00004 Gabi-Chr1434 75552 92473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1434g00004 7 844 MAP Kinase Kinase Kinase Kinase AT1G69220 59.977 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Gabi1434g00004 Pkinase 3.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1434g00004 - - gmx:100804995 1314.67