Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1434g00003 ATGACACCAGAGTTTCACTATCTGTTTTTCCCTGAACTGTTTCAGGCACCATTTTTCAGTTTCCAAGCTGCTATATGCACTCTTTTGTTCACACTCGCCTTCCTATTGTGGCTTTCACCTGGTGGGCTCGCTTGGGCCCTTAAGTTTCCGGCTCGGTCTGTTATTCCTGGTCCTTCGGGCCGTCCCGTTTCTGGTTTGCTTAGTGTTTTTTCCGGTCTGACACCTCACCGTGCTCTGGCTAAGTTAGCACGGACCTACCAGGCTGAGTCGCTGATGGCTTTTTCGGTTGGTTTGACTCGGTTTGTTATTTCGAGCGAACCGGAGTCTGCTAAGGATATTTTGGGTAGTTCCGGTTTTGCTGATAGGCCGGTGAAGGAATCGGCTTATGAGCTTCTGTTTCACAGAGCAATGGGGTTCGCACCGTATGGTGAGTACTGGAGGAACCTGAGGAGGATTTCTGCTACTCACTTGTTCTGCCCAAGGAGAATCTTGGGTTTCGAAGGGTTCAGGCGTGAGGTTGGGTTGAAAATGGTGGAAGAGTTGAAAGGGTTGATGGTTGAAAAGGGACGTGTTGAGGTTAAAAAGGTTCTTCATTTTGGGTCGTTGAACAACGTGATGATGACTGTGTTTGGGAAGAGTTATGAGTTTGGTGATGGTGGTGATGGGGTTGAGCTTGAAGGGTTGGTCAAGGAAGGGTATGAGTTATTGGGGGTGTTTAACTGGAGTGACCATTTTCCTCTCCTTGGGTGGTTGGATTTGCAGGGAGTGAGGAAAAGGTGCAGGTGTTTGGTCACCAAGGTTAATGCTTTCGTTGGGAAGATCATCGAGGATCATAGAATGAAAAAGGTGTCCGGTGAATATTTGAAGGGTGACATGGGTGATTTCGTTGATGTGTTGCTTGATTTGGAGAAAGAAGACAAGCTCGGTGATTCTGACATGATTGCTGTTCTTTGGGAAATGATCTTCAGAGGAACTGACACGGTGGCTATTTTGCTGGAATGGATTTTGGCAAGGATGGTTCTTCATCCTGAGATACAAGCAAAAGCACAAGAGGAAATAGATGCTGTTGTTGGAAAGTTCGGGGTTGTTAAGGATGCTGATGTTCCCAATCTGCGTTATCTTCAGTGCATTGTGAAGGAGGCTCTGAGGGTGCACCCACCTGGGCCACTTCTTTCATGGGCTCGCTTAGCAATACACGATGTTGAGATAGGTGACAAGCATGTTCCCGCAGGTACAACAGCTATGGTGAATATGTGGGCCATAACCCACAACGAGAAGTTGTGGGCAGAACCAGAGGAGTTCAAGCCAGAGCGTTTTATGGAAGAGGATGTTAGTATAATGGGATCTGATTTGAGATTGGCTCCATTTGGGTCTGGGAGAAGGGTTTGTCCTGGTAAGGCTATGGGTTTAGCCTCTGTTCATCTCTGGCTTGCTCAATTGCTTCAAAGCTTTAAATGGGTGCCTGACGAAGATGGCTCTGTGGACTTGTCTGAGCGCCTTAAACTCTCCATGGAGATGAAAACCCCACTGGTTTGCAAGGTTGTCTCTAGGGTTGTGGCTGCTTGA 1566 0.4757 MTPEFHYLFFPELFQAPFFSFQAAICTLLFTLAFLLWLSPGGLAWALKFPARSVIPGPSGRPVSGLLSVFSGLTPHRALAKLARTYQAESLMAFSVGLTRFVISSEPESAKDILGSSGFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFCPRRILGFEGFRREVGLKMVEELKGLMVEKGRVEVKKVLHFGSLNNVMMTVFGKSYEFGDGGDGVELEGLVKEGYELLGVFNWSDHFPLLGWLDLQGVRKRCRCLVTKVNAFVGKIIEDHRMKKVSGEYLKGDMGDFVDVLLDLEKEDKLGDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQEEIDAVVGKFGVVKDADVPNLRYLQCIVKEALRVHPPGPLLSWARLAIHDVEIGDKHVPAGTTAMVNMWAITHNEKLWAEPEEFKPERFMEEDVSIMGSDLRLAPFGSGRRVCPGKAMGLASVHLWLAQLLQSFKWVPDEDGSVDLSERLKLSMEMKTPLVCKVVSRVVAA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1434g00003 521 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 SUPERFAMILY Cytochrome P450 55 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PANTHER CYTOCHROME P450 78A7-RELATED 20 517 - -
Gabi1434g00003 521 FunFam Cytochrome P450 78A5 48 517 - -
Gabi1434g00003 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gabi1434g00003 521 Pfam Cytochrome P450 56 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 Gene3D Cytochrome P450 50 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1434g00003 521 CDD CYP78 88 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1434g00003 Gabi-Chr1434 60868 62528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1434g00003 1 519 Cytochrome P450 AT1G13710 66.476 0.0 682