Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1433g00017 ATGGAGAGAAGTGAGGAGGTTATGAGGCGACGCATTCGTAAGAAGGGAAGTGGCGCGAGAACATGGCTGGTGGTTGACGGCGGCGGCAATAAAGAGACGGTGGAGGCTGGCCGGCAGATGATAATGAAGAGGACGGGGCTGACGGCACGTGACCTGAGGATACTGGACCCACTGCTGTCGCAGCCTTCGACGATTATGGGGCGTGAGAGGGCGATGGTGATAAATTTGGAGCACATAAAAGCTATTATCACTGCGAAAGAGGTTCTCTTACTCAATTCCAGAGACCCCTCTGTTATCCCTTTCGTCGATGAGCTTCACTCACGGATTCTTCATCACCACTCTGCCACTCCACCTCCGGTTTTTGAGGATCAAGATGGCATGAAGATTCTTCCATTTGAATTTGTAGCATTGGAGGCATGCCTCGAGGATACTTGTACTGCTTTGGAAAATGAGGCAAAGATATTGGAGCAGGAGACTCATCCTGCCTTGGATAAACTGACTTCAAAGATTAGTACTCTCAATTTGGAACGCGTTCGTAATGTTAAGAGCCGTTTAGTTGCCTTAACTGCTCGAGTTCGAAGGGTAAGGGATGAATTAGAGCACTTGCTGGATGATGATGAAGATATGGCCCAGCTGTACCTGACATACAAGTTATCTCAACAGCAGCTTGAAAATTCTTCTACCTCATCCATGAATGACGGGGATGACATGGAGAGTCAAGTTCTTCAACCAGATATAAATGACAGGATTCCTTCTGATATATCATTGGAATTTGGTGGAGGTTCTGCAAGTGATGAAGATCATCAAAATGCTGCTGACTACTCCACAGACCAAATGTTTGGTGCATCTAATGGAGTTGGTATTGAAATCAAAGAAACCCAGGATGGCGCTACCTACAGTGCTGTAACCAAGAAACCTGATGTGCAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTGCAAATTGGTGGCACATTGAACAAACTATCTGCGCTGAGGGATTATGTTGAAGACACAGAGGACTATATAAACATTAGGCTGGATGACAAACAGAACCGTCTCTTGCAAATGGCAGTGAAGTTGGGCACAGCAGATGTGCTTTTGAATGCCTTTATTGGAGTGACTGGTATTTTTGGCATGAATATTCATATAGAGCTATATGATACTGGGTTGCCACAGTTCCTTGGGACTATTTTTGGATGCACTGCTGTTTGCTTATTCTTGTTTATGGTTTCCATTGCTTGGTATAAGCGCAGGCGCTTGCTGGAATAG 1272 0.4552 MERSEEVMRRRIRKKGSGARTWLVVDGGGNKETVEAGRQMIMKRTGLTARDLRILDPLLSQPSTIMGRERAMVINLEHIKAIITAKEVLLLNSRDPSVIPFVDELHSRILHHHSATPPPVFEDQDGMKILPFEFVALEACLEDTCTALENEAKILEQETHPALDKLTSKISTLNLERVRNVKSRLVALTARVRRVRDELEHLLDDDEDMAQLYLTYKLSQQQLENSSTSSMNDGDDMESQVLQPDINDRIPSDISLEFGGGSASDEDHQNAADYSTDQMFGASNGVGIEIKETQDGATYSAVTKKPDVQELEMLLEAYFVQIGGTLNKLSALRDYVEDTEDYINIRLDDKQNRLLQMAVKLGTADVLLNAFIGVTGIFGMNIHIELYDTGLPQFLGTIFGCTAVCLFLFMVSIAWYKRRRLLE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1433g00017 423 FunFam Magnesium transporter MRS2-1 10 93 - -
Gabi1433g00017 423 Gene3D - 6 93 - -
Gabi1433g00017 423 CDD Mrs2_Mfm1p-like 22 421 IPR039204 -
Gabi1433g00017 423 Gene3D Magnesium transport protein CorA, transmembrane region 97 354 - -
Gabi1433g00017 423 Coils Coil 178 205 - -
Gabi1433g00017 423 Coils Coil 138 158 - -
Gabi1433g00017 423 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 10 422 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1433g00017 Gabi-Chr1433 199186 202980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1433g00017 21 423 MRS2 Gene Family AT3G19640 55.281 1.43e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1433g00017 - - ccaj:109817554 486.108