Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1430g00011 ATGGAGTCAACGACTCGCACGTCCCTCTTCGTCAAAACCCTTATCTTCTTCTGCTTCTTTCAAAGCCCTCTCTCAGTCTCAGCTTCTTCTTCACAATCAGCTTTGAAATCAACTCATCCATTCCCTAAAGAAGCCCTACCCACCAAATATGGTTACCTCCCAGTCAGCCCCACTTCCAGTTCTTCCATTTTCTACACTTTCTATGAAGCCCATAACTCAACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTATGAGCTCGGACCCTGGCGTGTCACAAAATCCCTTACCCTTGAACCCAACCCTGGTGCTTGGAATAGAATTTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACGCCTGAAGAAATTCCAACCGATCAAAACGCCGTTGCCAAGCACCTTTTTGCTGCTATTACACGGTTTGTTCAACTTGACCCTGTTTTCAAGCATCGTCCTATTTATATTACAGGGGAAAGCTATGCCGGGAAGTATGTACCTGCTATTGGGTATTACATATTGGAGAAAAATGCTCAGTTGCAAGGGTCTGAAAGAGTGAATTTGGCTGGTGTGGCAATTGGTGATGGGTTAACAGACCCTGTAACCCAAGTGGTTACTCATGCTGCCAATGCTTACTATGTTGGATTGATCAATGATAGGCAAAAGAATGAGTTGGAGAAAGCTCAATTGGAAGTAGTTGGATTGGCTCGGATAGGGAATTGGAGTGAAGCAGCGGATGCGAGAAACGAAGTTTTGAGAGTGTTGCGAAACATCACAGGGTTGGCTACTTTGTATGACTATACAAGGAAAGCTCCTTATGAAGATGACTTGGTTGCTGAGTTCTTGAACTTTGCTGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCATTTGTGTATGTGTTATGCAGTGACATTGTAGATGCTGCACTGCATGCTGACGCGATGAAGAGTGTGAAATATATGGTAGAGCACTTGGTGAGGAAGAGCAGGGTGTTGTTATACCAAGGTCAACATGATTTGATGGATGGAGTGGTACAAGTTGAGGCATGGGTCAAGACAATGAAATGGGAAGGAATTGTGGAGTTTCTGAATGCAGAAAGGAAGATTTGGAAGGTGAATGGAGAGCTTGCTGGGTATGTACAAAGTTGGAAGTCACTCACCAATGTTGTGGTTTTGGGTGCTGGCCATCTTTTGTCTGCTGACCAGGCTGTGAATTCTCAAACAATGATAGAAGACTGGGTTTTGGAAAGGGGTTTGTTTGCTCATGACCATCACATAAATGATTCACTAGATATCGAAATGCCCCTCGAAGCTCCACACATTCTTAGTTCCTTTTGA 1404 0.4501 MESTTRTSLFVKTLIFFCFFQSPLSVSASSSQSALKSTHPFPKEALPTKYGYLPVSPTSSSSIFYTFYEAHNSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLTLEPNPGAWNRIFGLLFLDSPIGTGFSVASTPEEIPTDQNAVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGYYILEKNAQLQGSERVNLAGVAIGDGLTDPVTQVVTHAANAYYVGLINDRQKNELEKAQLEVVGLARIGNWSEAADARNEVLRVLRNITGLATLYDYTRKAPYEDDLVAEFLNFAEVKKALGVNESFVYVLCSDIVDAALHADAMKSVKYMVEHLVRKSRVLLYQGQHDLMDGVVQVEAWVKTMKWEGIVEFLNAERKIWKVNGELAGYVQSWKSLTNVVVLGAGHLLSADQAVNSQTMIEDWVLERGLFAHDHHINDSLDIEMPLEAPHILSSF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1430g00011 467 SUPERFAMILY alpha/beta-Hydrolases 48 436 IPR029058 -
Gabi1430g00011 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 422 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 Pfam Serine carboxypeptidase 47 436 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gabi1430g00011 467 Coils Coil 240 260 - -
Gabi1430g00011 467 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Gabi1430g00011 467 FunFam Carboxypeptidase 32 443 - -
Gabi1430g00011 467 Gene3D alpha/beta hydrolase 25 447 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1430g00011 Gabi-Chr1430 85406 87221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1430g00011 303 436 Calmodulin-binding Proteins AT2G22960 22.628 7.26e-08 50.8