Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1430g00001 ATGGAGCCTAATGCAAGTAGCATGCATTCTCATTGCGTAGAAATGACCATGGAAATACACCAAGTTGTTCCACCACCCCACAAGAGCACCCTACAGAAACTCAAGGCCAGGCTCAAGGAAACTTTTTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAACCACTTCAGAGAAAAATATTCCTCGGAGCTCAATATGTGTTCCCTATTCTTCAATGGGGTCCTAATTACAGCTTCAAACTCTTTAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTGTGGGACTATATTCTAGTTTTGTTCCCCCACTTGTTTATGCTATTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTTTCCATTGCTTCTCTTGTGTTGGGATCCATGCTTAGACAGGAAGTGTCTCCCACGGCAGACCCAGTTCTGTTTCTTCAACTAGCGTTTACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTTCTCTAGGAATCCTAAGGCTAGGATTTATCATTGATTTTCTATCCAAGGCAATCCTTATTGGGTTCATGGCTGGAGCTGCTATAATTGTGTCTTTGCAACAGCTCAAGAGTCTCCTTGGAATCACACATTTCACTAAGCAGATGGGCCTGATTCCTGTTATGAGTTCAGTTTTTCACAATACACATGAGTGGTCATGGCAAACGATATTGATGGGAATTTGCTTCTTGGTGCTTCTACTACTAGCAAGACACCTTAGCATGAGGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTCATGTCTGTCATCATCTCTACTCTTTTGGTTTTTGCAATTAAGGCTCAAAATCATGGCATCAGTGTAATTGGAAAATTGCAAGAAGGAATAAATCCTCCTTCATGGGATATGTTGCGCTTTCATGGAAGTCACCTAGGTCTAGTCATGAAAACTGGGCTTATCACTGGCATTTTATCCCTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTCAGAAACTACAAAGTGGATGGAAATAAAGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGATCTGCTGTTAATAATAACGCAGGTGCAAAGACAGCAGCTTCAAATGTAGTGATGTCTGTGACAGTCTTGGTGACACTCCTTTTTCTTATGCCATTGTTCCAATACACGCCTAATGTTGTGTTGGGTGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATATCCCTGCTGCTTGTCACATTTGGAGCATAGACAAATTCGATTTCATTGTGATGTTGACTGCTTTCTTGGGTGTTACTTTTATCTCTGTCCAGCAAGGCCTTGCTTTTGCAGTTGGGTTATCAACTTTAAGGATACTCCTGCAAATTACTAGGCCTAAAACAGTAATGTTGGGGAATATACCAGGGACGGACATATATAGAGATCTTCACCAATATAAGGAAGCTGTAAGAATACCTGGTTTTCTTATATTAAGCATTGAAGCTCCCATCAACTTTGCTAACATCACATATCTCAACGAGAGGACATTACGATGGATTGAAGACGAAGAAGATAACATAAAGGAAAACTCAAGCCTTCGATTTTTAATCCTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAGCAACACTGGAAAATAAGGACGTTGAGCTTGTCTTGGTGAATCCTCTGGCTGAGGTCATAGAAAAGCTGAAAAAAGCAGATGTAGCTAATGATTTCATACAAGCAGATAACCTTTTCTTGACGGTTGGAGAGGCAGTAGCTTCACTTTCATCATGA 1914 0.4201 MEPNASSMHSHCVEMTMEIHQVVPPPHKSTLQKLKARLKETFFPDDPLRQFKGQPLQRKIFLGAQYVFPILQWGPNYSFKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAILGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKQMGLIPVMSSVFHNTHEWSWQTILMGICFLVLLLLARHLSMRKPKLFWVSAGAPLMSVIISTLLVFAIKAQNHGISVIGKLQEGINPPSWDMLRFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNVVMSVTVLVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWSIDKFDFIVMLTAFLGVTFISVQQGLAFAVGLSTLRILLQITRPKTVMLGNIPGTDIYRDLHQYKEAVRIPGFLILSIEAPINFANITYLNERTLRWIEDEEDNIKENSSLRFLILEMSAVSAIDTSGISLFKELKATLENKDVELVLVNPLAEVIEKLKKADVANDFIQADNLFLTVGEAVASLSS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1430g00001 637 NCBIfam sulfate permease 69 631 IPR001902 GO:0016020|GO:0055085
Gabi1430g00001 637 FunFam Sulfate transporter 31 493 637 - -
Gabi1430g00001 637 SUPERFAMILY SpoIIaa-like 519 635 IPR036513 -
Gabi1430g00001 637 Pfam Sulfate permease family 82 462 IPR011547 GO:0016020
Gabi1430g00001 637 Pfam STAS domain 514 631 IPR002645 -
Gabi1430g00001 637 Gene3D STAS domain 493 636 IPR036513 -
Gabi1430g00001 637 ProSiteProfiles STAS domain profile. 513 635 IPR002645 -
Gabi1430g00001 637 PANTHER SULFATE TRANSPORTER 29 634 IPR001902 GO:0016020|GO:0055085
Gabi1430g00001 637 CDD STAS_SulP_like_sulfate_transporter 514 628 - -
Gabi1430g00001 637 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1430g00001 Gabi-Chr1430 9449 16748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1430g00001 1 637 Inorganic Solute Cotransporters AT3G15990 65.884 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1430g00001 K17471 - gmx:100787284 1127.08