Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1427g00014 ATGAAGCGTTATGTTTATATCAATGATGATGAATCATCACATGATATTTTCTGTGATAATCGTATATCCAACAGAAAATATACTGTATTGAATTTTATCCCAAAAAATTTATGGGAACAGTTTAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTGATCTTTATTTTTGCAGTCTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATCTTTCGGACAAGAAGGCAAATGAGAAGGAAGTTTGGGTTGTCAGGCAGGGTGTGAAGAAACTAATCCAAGCCCAGGATATTCGTGTAGGTAGTATAGTTTGGCTACGTGAAAATGATGAAGTTCCTTGTGACCTTGTTTTGATTGGTGCCTCTGATCAACAGGGACTTTGCTATGTAGAGACTGCTGCACTGGATGGTGAAATTGATCTGAAGACACGGGTCATACCTTCTGCTTGCATGGGAATTGAGTTTGAACTATTGCACAAAATCAAGGGTGTAATTGAGTGCCCTAGTCCAGATAAAGACATAAGAAGATTTGACGCAAACATGCGGTTGTTCCCCCCATTTATTGATAATGATATATGCCCTTTAACCATAAAAAACACAGTTCTTCAGTCATGTTACTTACGAAATACTGAGTGGGCATGTGGAGTGGCTATATATACAGGCAATGAAACCAAGATGGGTATGAGTAGAGGCATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGAGCTATATTTGTATTCCAAATTGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGATACAGAAGCAAAGCAACAATGGTATGTTCTTTACCCAGATGAAGGCCCTTGGTTTGAACTATTGGTCATACCTTTGCGGTTTGAGCTTCTTTGTTCCATCATGATACCTATTTCAATCAAGGTATCTCTGGATCTGGTGAAGAGCTTATATGCTAAATTTATTGATTGGGACCATCATATGATTGATCTGGAGACTGGTATTCCATCCCATGCAACAAATACAGCAATAAGCGAGGACCTCGGACAAGTTGAGTATATTTTGACTGACAAAACAGGCACACTGACTGAGAATAAGATGATATTGAAAAGATGTTTTATCAGCGGCATTTTCTATGGAAATGACAATGGAGATGCACTGAAAGACATAGAGCTTCTCAATGCTGTTTCAAACGGTTCTCCTGATGTTATACAATTTCTTACAATTATGGCGATTTGTAATACTGTCGTGCCTACGCGAAGTAAAACTGGAGATGTCTTGTACAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCTTGCTGCTGGTAAACTGAATATGGTTTTCTTCAACAAGAATGGAAACATTCTAGAAGTCAAGTTCAACTCTTCAGTACTTCAGTACGAAGTCCTGGAAACCCTAGAGTTCACCTCTGATAGGAAAAGAATGTCAGTAGTGGTGAAAGATTGCCAAAATGGAAAGATCCTTCTTCTGTCAAAAGGTGCAGATGAGGCAATTCTTCCATTTGCTCGCACTGGGCAGCAAACCCGAAACTTCATTGAAGCTGTGGAGCAATATGGTCACTTGGGATTACGTACACTATGTTTGGCTTGGCGTGATTTAAAGGAAGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCCAGTGGTACCTTGGTTGATAGGGAGTGGAGAGTTGCTGAGGTCTGCCAAAGACTAGAACATGATTTTGAAGTTCTTGGTGTAACAGCAATAGAGGATCGCTTACAGTATGGAGTGCCTGAAACAATAGAAACACTAAGAAAAGCTGGACTGAATTTTTGGATGCTTACTGGAGACAAGCAGAGTACTGCAATACAAATTGCCCTGTCATGTAATTTTATTTCCCCAGAACCCAGGGGACAGCTTTTATCGATTGATGGCAAAACAAAGGATGAGGTTCATACAAGTTTGGAGAGAGTGCTTCGTACAATGCAGATAACTGCCTCAAAACCTAAGGATGTGGCTTTTGTTGTTGATGGCTGGGCTCTTGAGATTGCACTTAAGCACTACCGTAAAGCTTTTACTGAGCTGGCAATATTATCTAGGACTGCTATATGTTGTCGTGTGACGCCATCGCAAAAAGCGCAGCTTGTTCAGATCTTAAAATCATGTGATTATAGAACACTGGCAATTGGTGATGGTGGGAATGATGTAAGGATGATACAGCAAGCAGACATCGGTGTTGGCATTAGTGGCAAAGAAGGATTGCAGGCAGCGAGGGCAGCTGATTACAGTATCGGAAAGTTTAGGTTCCTGAAAAGATTAATTCTTGTCCATGGCCGGTATTCTTACAACCGTACAGCATTTCTTTCTCAGTATTCATTCTATAAGTCCCTACTGATATGTTTCATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACCAGCCTCTTCAATTCTGTTAGCTTGATGGCCTATAATGTTTTCTACACTAGTGTTCCTGTTCTAATCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAAATTTTATTTTATTGCCAAGCGGGGAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTGTTTGTAATAAGCATACATGCCTATGCCTATGAGAACAGTGAAATGGAGGAGGTTTCAATGGTTGCACTTTCTAGTTGTATATGGTTGCAGGCTTTTGTAGTAACAATGGAGACCAATTCCTTCACAATATTGCAGCATCTTGCAATATGGGGCAATTTGGCTGCCTTTTATGCCATTAACTGGATCTTCAGTACTCTTCCTTCGTCAGGGATGTATACAATTATGTTTCGGTTGTGTCAACAACCATCATATTGGATAACAATTTTTCTCACAGTTGCAGCTGGGATGGGTCCAATTCTAGCCATCAAGTACTTTCGATATACATATAGACCAAGCAAAATCAATACGCTTCAGCAGGCTGAACGTTTGGGTGGGCCAATTTTGTCTCTCGCTACCATTGAGTCTCAGCCCAGATCTATAGAGAAAGATATTTCACCCTCATCAATAACTGAACCCCAAGACAGAAATACTGTTCATGAAAATATGTTATCAGATTCTCTAAATTCCACCAGAAGATCTTTTGGAACAGGAACACCATTTGATTTTTTTCAGTCACAGTTAAGATCATCCCTATCTAGCTACACAAGAAATAAGGACAAGTGA 3318 0.4039 MKRYVYINDDESSHDIFCDNRISNRKYTVLNFIPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGVKKLIQAQDIRVGSIVWLRENDEVPCDLVLIGASDQQGLCYVETAALDGEIDLKTRVIPSACMGIEFELLHKIKGVIECPSPDKDIRRFDANMRLFPPFIDNDICPLTIKNTVLQSCYLRNTEWACGVAIYTGNETKMGMSRGIPEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEAKQQWYVLYPDEGPWFELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHHMIDLETGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMILKRCFISGIFYGNDNGDALKDIELLNAVSNGSPDVIQFLTIMAICNTVVPTRSKTGDVLYKAQSQDEDALVLAAGKLNMVFFNKNGNILEVKFNSSVLQYEVLETLEFTSDRKRMSVVVKDCQNGKILLLSKGADEAILPFARTGQQTRNFIEAVEQYGHLGLRTLCLAWRDLKEDEYQEWSLMFKEASGTLVDREWRVAEVCQRLEHDFEVLGVTAIEDRLQYGVPETIETLRKAGLNFWMLTGDKQSTAIQIALSCNFISPEPRGQLLSIDGKTKDEVHTSLERVLRTMQITASKPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGKEGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLISVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYENSEMEEVSMVALSSCIWLQAFVVTMETNSFTILQHLAIWGNLAAFYAINWIFSTLPSSGMYTIMFRLCQQPSYWITIFLTVAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLATIESQPRSIEKDISPSSITEPQDRNTVHENMLSDSLNSTRRSFGTGTPFDFFQSQLRSSLSSYTRNKDK 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1427g00014 1105 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Gabi1427g00014 1105 SUPERFAMILY HAD-like 368 794 IPR036412 -
Gabi1427g00014 1105 FunFam Phospholipid-transporting ATPase 449 592 - -
Gabi1427g00014 1105 SFLD Haloacid Dehalogenase 362 801 - -
Gabi1427g00014 1105 NCBIfam HAD-IC family P-type ATPase 716 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi1427g00014 1105 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Gabi1427g00014 1105 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Gabi1427g00014 1105 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Gabi1427g00014 1105 Gene3D - 451 578 IPR023299 GO:0000166
Gabi1427g00014 1105 FunFam Phospholipid-transporting ATPase 602 789 - -
Gabi1427g00014 1105 SFLD p-type atpase 362 801 IPR044492 -
Gabi1427g00014 1105 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Gabi1427g00014 1105 Gene3D - 75 251 - -
Gabi1427g00014 1105 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Gabi1427g00014 1105 NCBIfam phospholipid-translocating P-type ATPase 425 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi1427g00014 1105 FunFam Phospholipid-transporting ATPase 75 251 - -
Gabi1427g00014 1105 Pfam E1-E2 ATPase 99 291 - -
Gabi1427g00014 1105 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Gabi1427g00014 1105 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 569 IPR023299 GO:0000166
Gabi1427g00014 1105 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1016 IPR023298 -
Gabi1427g00014 1105 Gene3D - 602 790 IPR023214 -
Gabi1427g00014 1105 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1027 - -
Gabi1427g00014 1105 Pfam haloacid dehalogenase-like hydrolase 377 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1427g00014 Gabi-Chr1427 99756 144617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1427g00014 1 1102 Primary Pumps ATPases AT5G44240 83.500 0.0 1954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1427g00014 K01530 - gmx:100786505 1991.47