Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1420g00015 ATGGAAACCTGGTTCGTCATCCTAGTTTCTTTCTGCTTCTGTGTGCTTATCAGGGCCATCCTCTCCCTTTACTCATCCACCAGTACCAACAGCAACAAAAACAAAAACAAAAACAAGAGCATCAAAATCCCTCCTGGCCCTCCTCACATCCCCATCATTACAACCATCGCATGGCTAAGAAAAATCTCAGAATTTGTGCAAATTCTTCGAGGCCTCCACGCCAAATACGGCCCCATCATCACTCTCCGCATTGGTTCTCTTCCATCCATATTCATCCGTGATCGAACCCTCGCCCACCAAGCTTTAATACAAAACGGTTCTCTCTTCTCCGACCGCCCCAAACCTCTTCCCACTCGAAAACTCTTCTCCAGCAACCAACATAACATCACCTCCGCCTCTTACGGCCCAACATGGCGCGTCCTCCGCCGCAACCTCACCTCCGAGATGCTCCACCACTCCCGGGTCAAATCCTTTTCCTCAATCCGCAAGTGGGTCCTACAAACCCTCCTCACCCGATTAAAATCCGATTCGGAATCAAACTATTCCATACGGGTCGTGGACCACTTTCTATATGCCATGTTCTGCTTGCTTGTGTTCATGTGTTTCGGTGAAAGAGTTAACGATGAGAAAGTCAAAGACATTGAGCGTGTCCAGCGCAAGCCGCTTCTCAGCATTAATAGATTCAACATACTAAATTTGTGGCCAAAACTCACTGCGATTTTGTTCCGTGAACGTTGGGAGGAGTTGTTGCGGCTTCGGAAGGAGCAAGAAGAAGTGTTGGTTCCGCTGATACGAGCGAGGAAGCAAGCTAAGGAGGGTAGAGTGAGCAACGACTCAAACACTGTCGTTTCGTATGTGGATACTTTGTTGGATTTGAAGTTGCCTGAGGAGAAGCGCAAGTTGAATGAAGGGGAAATTGTTAGCTTGTGTTCGGAGTTTCTGAATGCTGGCACGGACACAACTTCCACTGCATTGCAGTGGATTATGGCTAATTTGGTGAAGTACCCTCATGTTCAACAGAAGCTTGTGGAGGAGATTAAGGAGGTGGTGGGTGATAGAGAGGTGAAGGAAGTGACAGAGGAAGATTTGGAGAAAATGCGGTATCTCAAAGCTGTGATTTTAGAAGGGTTGAGGCGTCACCCACCGGGGCACTTAGTGTTGCCACATGCGGTGACTGAGGATGTTATTTTGAATGGTTATTTGGTGCCTAAAAATGGGACTGTGAATTTCATGGTGGCAGAGATGGGGTGGGACCCTGAGGTTTGGGAAGATCCCATGGAATTTAAGCCAGAGAGATTCTTGAACCAGAACAAAGCTCAAGTTGAGGCGTTTGATATTACTGGGAGCAGAGAGATCAAGATGATGCCGTTTGGAGCAGGAAGGAGGATTTGTCCTGCCTATACTTTGGCAATGCTCCATTTGGAATACTTTGTTGCCAATTTGGTTTGGAGTTTTGATTGGAAGGTTTCGGAAGGAGGTCATGTTGATTTCACAGAAAAACAGGAATTCACTGTGGTCATGAAAAATCCTTTGCAGGTTCATATTTCTCCAAGGATCTAA 1560 0.4679 METWFVILVSFCFCVLIRAILSLYSSTSTNSNKNKNKNKSIKIPPGPPHIPIITTIAWLRKISEFVQILRGLHAKYGPIITLRIGSLPSIFIRDRTLAHQALIQNGSLFSDRPKPLPTRKLFSSNQHNITSASYGPTWRVLRRNLTSEMLHHSRVKSFSSIRKWVLQTLLTRLKSDSESNYSIRVVDHFLYAMFCLLVFMCFGERVNDEKVKDIERVQRKPLLSINRFNILNLWPKLTAILFRERWEELLRLRKEQEEVLVPLIRARKQAKEGRVSNDSNTVVSYVDTLLDLKLPEEKRKLNEGEIVSLCSEFLNAGTDTTSTALQWIMANLVKYPHVQQKLVEEIKEVVGDREVKEVTEEDLEKMRYLKAVILEGLRRHPPGHLVLPHAVTEDVILNGYLVPKNGTVNFMVAEMGWDPEVWEDPMEFKPERFLNQNKAQVEAFDITGSREIKMMPFGAGRRICPAYTLAMLHLEYFVANLVWSFDWKVSEGGHVDFTEKQEFTVVMKNPLQVHISPRI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1420g00015 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 511 - -
Gabi1420g00015 519 CDD CYP77_89 75 512 - -
Gabi1420g00015 519 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gabi1420g00015 519 Gene3D Cytochrome P450 35 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 Pfam Cytochrome P450 44 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00015 519 FunFam Cytochrome P450 family protein 37 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1420g00015 Gabi-Chr1420 138170 139729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1420g00015 1 518 Cytochrome P450 AT1G64940 57.034 0.0 604