Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1420g00013 ATGGAAACCTGGTTCTTCATCCTCGTTTCTCTCTGTTTCTGTGCGCTCATCAGGGCCATTGTCTCCCTTTACTCATCCACCACCACCACCAACAACAACAACATTAACAAAAAAAAGAGCATTAAAATTCCACCTAGCCCTCGTCACATCCCCATCATCACAAGCGTCACATTGCTCCTAAAATCAGTCACAGAACTAGAACTTATTCTTCGAGGCCTTCACGCTAAATACGGTCCCATCCTCACTCTCCGCATTGGTTCTCTTCCATCCATATTCATCCGTGATCGAACCCTCGCCCACCAAGCTTTAATCAAAAACGGTTCTCTCTTCTCTGACCGTCCCAAACCTCTTCCCACCGGAAAAGTCTTCTCCAGCGAACAACATAACATCAGCTCCACCTCCTACGGCCCCACCTGGCGCATCCTCCGCCGCAACCTCACCTCCGAGATACTTCACCACTCTCGGGTCAAATCCTTTTCCAGTACCCGCAAGTGGGTCCTGGAAACCCTCCTCACCCGATTAAAATCCGAGTCGGAATCAAACAATTCCATACGGGTCATGGACCACTTTCAATACGCCATGTTCTGCTTGCTTGTGTTCATGTGTTTCGGTGAAAGAGTTGACGATGAGAAAGTCAAAGACATCGAGCGTGTCCTGCGCCAACTGATTCTCAGCCTTAACAGATTCAACATCCTAGATTTCTGGCCAAAACTCACTGCGATTTTGTTCCGCAAACGTTGGGAGGAGTTGTTTCGGGTTCGGAAGGAGCTAGAAGATGTGTTGGTTCCGATGATAAGAGCGAGGAAGCAAGCTAAGGAGGGTAGAGTGAGCGATGACTCAAACTCTGTCGTTTCGTATGTGGATACTTTGTTGGATTTGGAATTGCCTGAGGAGAAACGCAAGCTGCATGAAGGGGAAATTGTTACCGTGTGTGCCGAGTTTATGAATGCTGGCACAGACACAACTTCCACTGCGTTGCAGTGGATTATGGCCAATTTGGTGAAGTACCCTCAGGTTCAACAGAAGCTTTTGGAGGAGATTAGGGAGGTGGTGGGGGATAGAGAGGATAAGGAAGTGAAAGAGGAAGATTTGGAGAAAATGGGGTATCTCAAAGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCGGGGCACTTTGTGTTGCCACATGCGGTGACTGAGGATGTTGTTTTGAATGGTTATTTGGTTCCTAAGAATGGGACTGTGAATTTTATGGTGGCAGAGATGGGGTGGGACCCTGAGGTTTGGGAAGATCCCATGGAGTTCAAGCCAGAGAGATTCTTGAAAAAGAACAAGGCTGAAGTTGAGGCTTTTGATATTACTGGAACCAAAGAGATCAAGATGATGCCGTTTGGAGCAGGAAGGAGGATTTGTCCTGCCTATAATTTGGCAATGCTCCATTTGGAATACTTTGTTGCCAATTTGGTTTGGAGTTTTGATTGGAAGGTTTCGGAAGGAGGTCATGTTGATTTGACTGAAAAGGAGGAATTCACTGTGGTCATGAAAAATCCTTTGCAGGTTCATATTTCTCCAAGGATCTAG 1563 0.4696 METWFFILVSLCFCALIRAIVSLYSSTTTTNNNNINKKKSIKIPPSPRHIPIITSVTLLLKSVTELELILRGLHAKYGPILTLRIGSLPSIFIRDRTLAHQALIKNGSLFSDRPKPLPTGKVFSSEQHNISSTSYGPTWRILRRNLTSEILHHSRVKSFSSTRKWVLETLLTRLKSESESNNSIRVMDHFQYAMFCLLVFMCFGERVDDEKVKDIERVLRQLILSLNRFNILDFWPKLTAILFRKRWEELFRVRKELEDVLVPMIRARKQAKEGRVSDDSNSVVSYVDTLLDLELPEEKRKLHEGEIVTVCAEFMNAGTDTTSTALQWIMANLVKYPQVQQKLLEEIREVVGDREDKEVKEEDLEKMGYLKAVILEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKNGTVNFMVAEMGWDPEVWEDPMEFKPERFLKKNKAEVEAFDITGTKEIKMMPFGAGRRICPAYNLAMLHLEYFVANLVWSFDWKVSEGGHVDLTEKEEFTVVMKNPLQVHISPRI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1420g00013 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 512 - -
Gabi1420g00013 520 FunFam Cytochrome P450 family protein 37 520 - -
Gabi1420g00013 520 Pfam Cytochrome P450 44 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 Gene3D Cytochrome P450 35 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 SUPERFAMILY Cytochrome P450 44 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 CDD CYP77_89 76 513 - -
Gabi1420g00013 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Gabi1420g00013 520 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00013 520 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1420g00013 Gabi-Chr1420 100286 101848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1420g00013 1 519 Cytochrome P450 AT1G64940 55.703 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1420g00013 K24184 - gmx:100788826 733.791