Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1420g00012 ATGGAAACCTGGTTTGTGATCCTAGTTTCTTTCTGTTGCTGTGTGCTTATCAGGGCCATCCTCTCCCTTTACTCATCCAACACCAACACCAACACCAACAAAAACAATGACATAAAAAACAAGAGCATTAAAATCCCTCCTGGCCCTCTTCACATCCCCATCATCACAACCATCGCATGGCTAAGAAAAATCTCAGAACTTGAGCAAATTCTTCGAGGCCTCCACGCCAAATATGGTCCCATCATCACTATCCGAATTGTCTCTCGCCCATCCATATTCATCCGCGATCGAACCCTCGCCCACCATGCCTTAATCCAAAACGGTTCTCTCTTCTCCGACCGACCCAAACCTCTTCCCACTCGAAAATTCTTGTCCAGCAACCAACATAACATCAGCTCCGCCTCTTACGGCCCAACGTGGCGCGTTCTCCGCCGCAACCTCATCTCCGAGATGCTCCACCACTCCCGGATCAAATCATTTTCCTCAATCCGCAAGTGGGTTCTAGAAACCCTCCTCACCCTATTGAAATCTGATTCCGAATCAAACGATTCCATATTGGTCATGGACCACTTTCAATACGCCATGTTCTGCTTGCTCGTGTTCATGTGTTTCGGTGAGAGAGTTGACGATGAGAAAGTCAAAGACATCGAGCGTGTCCAGCGCAAACTGCTTCTCAGCATTAACAGATTCAACATCCTAAATTTCTGGCCAAAACTCACTGCTATTTTGTTCCGCGAACGTTGGGAGGAGTTGTTGCGGCTTCGGAAGGAGCAAGAAGATGTGTTGGTTCCGCTGATACGAGCGAGGAAGCAAGCTAAGGAGGGTAGAGTGAGCAACGACTCAAATACTGTCGTTTCGTATGTGGATACTTTGTTGGATTTGAAGTTGCCTGAGGAGAAGCGCAAGCTGAATGAAGGGGAAATTGTTAGCTTGTGTTCGGAGTTTCTGAATGCTGGCACGGACACAACTTCCACTGCATTGCAGTGGATTATGGCGAATTTGGTGAAGTACCCTCATGTTCAACAGAAGCTTGTGGAGGAGATTAGGGAGGTGGTGGGTGATAGGGAAGTGAAGGAAGTGAAAGAGGAAGATTTGGAGAAAATGGGGTATCTCAAAGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCGGGGCACTTTGTGTTGCCACATGCGGTGACTGAGGATGTTGTTTTGAATGGTTATTTGGTGCCTAAAAATGGGACTGTGAATTTTATGGTGGCAGAGATGGGGTGGGACCCTGAGGTTTGGGAAGATCCCATGGAGTTCAAGCCAGAGAGGTTCTTGAACCAGAACAAGGCTGAAGTTGAGGCTTTTGATATTACTGGGAGCAAAGAGATCAAGATGATGCCTTTTGGAGCCGGGAGGAGGATTTGTCCTGCCTATAATTTAGCAATGATCCATTTGGAATACTTTGTGGCCAATTTGGTTTTGAGTTTTGATTGGAAGGTTTCGGAAGGAGGTCATGTTGATTTCACAGAAAAACAGGAATTCACTACGGTCATGAAAAATCCTTTGCAGGTTCATATTTCTCCAAGGATCTGA 1566 0.4668 METWFVILVSFCCCVLIRAILSLYSSNTNTNTNKNNDIKNKSIKIPPGPLHIPIITTIAWLRKISELEQILRGLHAKYGPIITIRIVSRPSIFIRDRTLAHHALIQNGSLFSDRPKPLPTRKFLSSNQHNISSASYGPTWRVLRRNLISEMLHHSRIKSFSSIRKWVLETLLTLLKSDSESNDSILVMDHFQYAMFCLLVFMCFGERVDDEKVKDIERVQRKLLLSINRFNILNFWPKLTAILFRERWEELLRLRKEQEDVLVPLIRARKQAKEGRVSNDSNTVVSYVDTLLDLKLPEEKRKLNEGEIVSLCSEFLNAGTDTTSTALQWIMANLVKYPHVQQKLVEEIREVVGDREVKEVKEEDLEKMGYLKAVILEGLRRHPPGHFVLPHAVTEDVVLNGYLVPKNGTVNFMVAEMGWDPEVWEDPMEFKPERFLNQNKAEVEAFDITGSKEIKMMPFGAGRRICPAYNLAMIHLEYFVANLVLSFDWKVSEGGHVDFTEKQEFTTVMKNPLQVHISPRI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1420g00012 521 FunFam Cytochrome P450 family protein 39 521 - -
Gabi1420g00012 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 513 - -
Gabi1420g00012 521 Gene3D Cytochrome P450 38 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 CDD CYP77_89 77 514 - -
Gabi1420g00012 521 SUPERFAMILY Cytochrome P450 46 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 Pfam Cytochrome P450 46 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1420g00012 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1420g00012 Gabi-Chr1420 87018 88956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1420g00012 1 520 Cytochrome P450 AT1G64940 56.439 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1420g00012 K24184 - gmx:100805244 746.117