Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1418g00011 ATGACAAAGAACGGGGGTGAGAGTATGTTTATGACAATGGTTGAGGCCAGAATGCTTGACAATTGTGCTGACGTGAGCGAAGATGAGAAGCAAATCATGTATTTGTGGAACTCATTTGTAAGGAAGCATAATGTGGTGGCAGATACTCATGTTCCATGGGCATGTGAGGCTTTCTCCAAACTGCATGCCTCTGACTTTGCCCGATCCCCCTCGCTGGTTTGGTCTTGGAGAATATTTATGATCAAATTATACAATCATGGTCTGCTAGATGCTGGCACCTTAAATGACTGTAGTATTATTCTTGAGCAGTACAAGACACAGAATTTAGATCCAAAAACCTAG 342 0.424 MTKNGGESMFMTMVEARMLDNCADVSEDEKQIMYLWNSFVRKHNVVADTHVPWACEAFSKLHASDFARSPSLVWSWRIFMIKLYNHGLLDAGTLNDCSIILEQYKTQNLDPKT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1418g00011 113 PANTHER POLYCOMB GROUP PROTEIN 15 109 - -
Gabi1418g00011 113 Pfam VEFS-Box of polycomb protein 9 99 IPR019135 -
Gabi1418g00011 113 CDD VEFS-box_EMF2-like 10 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1418g00011 Gabi-Chr1418 179729 183380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1418g00011 15 105 C2H2 Transcription Factor Family AT5G51230 60.440 5.62e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1418g00011 - - gmx:100798991 157.147