Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1418g00005 ATGGGCGTCGAGAATTACCACGTGATCGAGCTCGTAGGTGAGGGTTCCTTCGGGAAGGTGTACAAAGGAAGACGCAAGTACACGGGACAGACCGTTGCAATGAAGTTCATAATGAAGCACGGGAAAACTGAGAAGGATATTCACAATTTGAGACAAGAAATCGAGCTTGTTGTTGGAGGCGTGAATGTCAATTGGGATGTAACAATTAGGGTTTTTCTGTCAAGTTATAGTGTCATGGGTGAGATGAGTCGATTGTATGTTGCCTTTCCCTTGTATTTTTGCAAATTGGCTATTTCTTTGACTTGGACCCGTGATTTTCTAGTCACAAGCAGCAACCTTATTGGTGTTTCAAGGCTCGCCTTCTTTGTTATCTTAAGAAAGTTGAAGCATGAGAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCCCAATATGCACAATTAGCTGATAGTGGAACAGGCCAACATGCATCATTAGAGATGTTGTCATGCTGA 525 0.419 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKTEKDIHNLRQEIELVVGGVNVNWDVTIRVFLSSYSVMGEMSRLYVAFPLYFCKLAISLTWTRDFLVTSSNLIGVSRLAFFVILRKLKHENIIQMLDSFESPQEFCVVTEFAQYAQLADSGTGQHASLEMLSC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1418g00005 174 Pfam Protein kinase domain 6 57 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1418g00005 174 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Gabi1418g00005 174 Gene3D Phosphorylase Kinase; domain 1 122 152 - -
Gabi1418g00005 174 PANTHER PROTEIN KINASE RELATED 3 154 - -
Gabi1418g00005 174 ProSiteProfiles Protein kinase domain profile. 6 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1418g00005 174 Gene3D Phosphorylase Kinase; domain 1 2 77 - -
Gabi1418g00005 174 SUPERFAMILY Protein kinase-like (PK-like) 3 160 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1418g00005 1 154 AGC Kinase Gene Family AT3G08720 24.845 8.62e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Gabi1418g00005 Pkinase 1.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1418g00005 K06228 - cit:102608885 115.546