Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1418g00004 ATGAAGAAACATGCTCTTAAACATGTTCTTATTGCTTGTTGCAGTAGAATTTCACCGCTATCTATTTTTATGCTCTGTGATTTTGGATTTGCACGTGCGATGTCCACGAACACAGTTGTTTTGCGATCTATAAAAGGCACTCCGTTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTTGTTGGCCAACCTCCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCGGTTAAATATCCAGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGGTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCATTTGTCAAAGAAACCTCCGATGAGCTTGAGGCCAGGGAATTGCGTGATATATCTTGTTCACCTGGGGACAGTGATGCAGCACGGAGGATTGAGGGAAAAACCATTCAAACACCAACAGGTTCAGCCACTTCTAGTACTTCAAGATGA 555 0.4144 MKKHALKHVLIACCSRISPLSIFMLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDELEARELRDISCSPGDSDAARRIEGKTIQTPTGSATSSTSR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1418g00004 184 Gene3D Transferase(Phosphotransferase) domain 1 16 179 - -
Gabi1418g00004 184 SUPERFAMILY Protein kinase-like (PK-like) 23 146 IPR011009 -
Gabi1418g00004 184 MobiDBLite consensus disorder prediction 170 184 - -
Gabi1418g00004 184 MobiDBLite consensus disorder prediction 151 184 - -
Gabi1418g00004 184 Pfam Protein kinase domain 23 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1418g00004 184 PANTHER PROTEIN KINASE RELATED 22 158 - -
Gabi1418g00004 184 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1418g00004 184 SMART serkin_6 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1418g00004 Gabi-Chr1418 75747 80265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1418g00004 24 151 AGC Kinase Gene Family AT3G08720 41.791 4.66e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Gabi1418g00004 Pkinase 2.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1418g00004 K06228 - gmx:100813995 284.648