Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1410g00015 ATGGAGAGCCAAAGCCAACTCCAAGATCCACATTTAGGGCAACCTAGCAGAGGAGCCTCCTTTCTCGGAACTTATTTCAATGGATTGAACACCTTATTAGGTGTTGGAATACTCTCAACGCCGTATGCACTTTCTCAAGGGGGATGGTCGAGTTTAATATTGCTAATCTTTGTGGCTGTGACATGTTGGTACACAGGGTTACTTCTCCAAAGGTGTATGGATAAGCATCCACAAATCAAATCCTACCCTGATATAGGTAAGGTTGCTTTTGGCTACAAAGGAAGAGTTGTGGTAGCCACTTTCATGTATTTAGAGCTCTATTTGATTGCAGTAGAGTTTCTTATACTAGGAGGTGACTGTTTGCAATACTTGTTTCCAAACAAGAACTTCAAAATTGGTAGTCTTAGAATTGGAGGTAAAAGAGGTTTTATTTTGCTTACTGCTTTGGCAATATTGCCAACAACATGGTTGAGAAGCATGGGGGTTCTGGCTTACATTTCTGCTAGTGGTGTAGTGGCTTCAATTATTTTGATCTCGTGTGTTCTATGGGCTGGAGCAGTTGACGGTGTGGGGTTTCATCAAAGAGGCCAGCTATGGAAACTGAGAGAATTGCCTGCTACTTTGAGTCTCTTTAATGTCTGCTACTGTGCTCACGCAGTATTTCCCACACTAAGCAACTCCATGAGAGATAATAGTCAATTTTCCAAGGTTTTACTGTTTTGCATTGTGACAAGCACCATAACCTATGGATTCATGGCCACTATAGGTTACTTGATGTTTGGAGATTATTCAGAGTCCCAAGTGATCTTAAATCTTTCAATGAAGAAAACAAGCACCTACATAGCTATTTATACAACATTATTCACCACATTCACTAAGTATGCAGTTGTAGTCACTCCAATTGCCGTTGCTATTGAGGACACATGGCGTTCCCACAAAAGCAGATTTGTTAGCATCTTAATTAGAACAATCATTGTGGTCTGTACTATGCTTGTGGCAATATTCGTTCCCTTTTTTGGGTATATTATGGCATTTATTGGTGCTTTCTCAGGTATCACTCTTGCATGGTTGTTACCTTGCTTGTGTTATCTAAAGATAAATGTAGCTGCACGGAGATTTGGGTTAGAGTTGTTGGTCATTATAGGAATTATATTAACAGGATCAATTATTGGTGTACTCGTTATAGAAAATGAAGATGGTGATAAACAAATTGAAGATGTGCCTAATCAGCTCTACGATATTTCTATTAGTGATAGTGAGGGTGAAACAAACCTCGGAGACGGTGGAAGTGGAAATTTTGATTAG 1305 0.3962 MESQSQLQDPHLGQPSRGASFLGTYFNGLNTLLGVGILSTPYALSQGGWSSLILLIFVAVTCWYTGLLLQRCMDKHPQIKSYPDIGKVAFGYKGRVVVATFMYLELYLIAVEFLILGGDCLQYLFPNKNFKIGSLRIGGKRGFILLTALAILPTTWLRSMGVLAYISASGVVASIILISCVLWAGAVDGVGFHQRGQLWKLRELPATLSLFNVCYCAHAVFPTLSNSMRDNSQFSKVLLFCIVTSTITYGFMATIGYLMFGDYSESQVILNLSMKKTSTYIAIYTTLFTTFTKYAVVVTPIAVAIEDTWRSHKSRFVSILIRTIIVVCTMLVAIFVPFFGYIMAFIGAFSGITLAWLLPCLCYLKINVAARRFGLELLVIIGIILTGSIIGVLVIENEDGDKQIEDVPNQLYDISISDSEGETNLGDGGSGNFD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1410g00015 434 PANTHER OS05G0424000 PROTEIN-RELATED 29 388 - -
Gabi1410g00015 434 Pfam Transmembrane amino acid transporter protein 18 367 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1410g00015 Gabi-Chr1410 182804 185648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1410g00015 2 393 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.557 9.12e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1410g00015 K15015 - pop:7492937 518.079