Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi140g00003 ATGGCCGATATCCCGAATGAATTAGCAAAGAAGGGTTTGGAGAAATTGATGGACTGGGCAATTGGAGAAGCACGATATATATGCTGCTTCACATCCATTGTTGCGGACTGTGAAAAGGAAAAAGAAATATTGGAAGCAAAAGTTAAGGCTGTGGGGCAACGTGTTGATCAACTCAAAAGAAGCTCACAAGATACTCCAGCTGATGTCACTTCTTGGGACAAGCGAGCTGATAAGCTCATTCAAGAGGACACAAAAACAAAAAAGACATGTTTTTTTGGATGGTGTCCTAATTGCATATGGCGATATAATAGGGGAAAAGAACTGGCCAATAAAACAGAGGATGCTAGAAGAATCAATCAAGAACTTGAAAACTTGAATATTACAGGACTCACTCCTCATCTCCTGGGCGTTGAATACCATTCTTCCCAAGATTACATTTCTTTTAAAAGTAGAGAGTTGATATACAATGAACTTTTGGATGCACTGACAGATGACAACTATATAACTGGATTGCAAGGGATGGGCGGCACTGGCAAAACAACATTGGCAAGAAAAGTAGGTCAGGAACTCGAGCAATCGAAACAATTTGATCATGTCATTGATACTACAGTGTCATATACTCCTGACATAAGAAAGATTCAAGATGATATTGCTGTACCCTTGGGATTAGCATCAGAATTGAAGGATAAGAGCGAATCAGAGCGATGCAAATTACTGCGAAGCAGATTAACCAATGGTGAGAAAATTCTTCTAATATTGGATGACGTATGGGAAAATACTGTGGAGCATATCAAATTTGAAAAAATAGGGATTCCAAAAAGCGATGATCACAAAGGTTGCAGAGTTCTTCTAACCACACGCGATCTAAACGCATGTCGCTCATTGGGATGTGAGAAGATAATTGAACTGCAGCTCTTACCAGAGGATGAGGCATGGACCCTGTTCGAAAAGCATGCTCATATAAGCAGTAGTACACCTAAAAGTTTGATGGATAAGGGACATGAAATTGTCAAAGAATGCAAAGGGTTACCAGTTGCAATTGCTATTATTGCCAGTCGTTTAAAGGGCGAACAACGTCAGGTACAGTGGAATGCAGCCTTAATATCCTTGCAAAAGCCCATGCATGGTGTTAATAAAGATTTGAATGAAATTTATAAATGTTTGTGGTATAGCTATGATAATATGAATAATGAAGAAGCCAAGAGATTGTTCCTCTTATGTTCTGTTTTTCCAGAAGATGAAGAACTTCCCACTGAAGTTTTAACTAGATTTGGCATAGGAGCGGGTCTTTTTGGGGAAGTTTATGACAAATATGATGATGTTCGAATCCAAGTAGCCGTTGCCAAAAATGAACTCATAGATTCTTGTTTATTGTTGAAGGCTGAGGGAGGACGTGTGAAAATGCATGACTTGGTTCGTGAAGTGGCTTTATTAAAGGTTAACAAAGAGATACGAGCAGTGAATCTGTCTGGCAAACATAAAAAATCATTGGTTGAAAGTGAGAAGGGTATGAAATATTTGTTATTGGAAGGAAACGAACATGATGTGTTTTCCTATAGGTTTGATGGTTCTGAACTTGAGATTCTTAAAATCAACTGTATGGTTGAAGAAGACTCGATGGAAATGCCAAATTCATTCTTCGAAAATATGGCAAAGCTTCGAGTTTTGTATTTATCATGTCAACATTGGGGAAGGCCTCTATCATTGCTACAGTCAATCGAGTCATTGACGAATATTCGATCTCTATTCCTTGAAAGATTGAGATTAGGTGACATCTCTATTTTGGGAAAACTACGAAGCCTTGAGGCTCTTGATTTGGTTTATTGTGAAGTGGTCGAATTGCCACGTGAAATTGCAGAGCTAGAGAGACTTAGATTGCTGAACTTGGATGGCTGTGAAATTGAAATGGATACTACATTTGATGTGATTGAAAGATGCTCATCACTAGAAGAATTGTATTTCACTAAATTCAAGGTTGACAGCTCATCAATTCATAAGAAAATAACCTTGCCTGCATTGCAAAGGTATCATATAAGAGATGGGTATGATGATGAAACATACGATTCAGTGTCAAAATATGTGTGTGCTTCATATATTGATACTTATTTCTCTGAAGCAACATTCAAGTATCTGGTACAAACAACAGAGATTCTTAAGCTAACAGGAATTGAGGGGGAGTGGAGAAATCTCATACCTGAGATTGTTCCGATAGATGACGGTATGAATTATCTTGTGAAACTTCGTTTGGAATCCTGGTCAAAATTACAGTGTCTAATTGACACTAGTCATATTAATTTTTCGGAACAAAACTTCTTCTCCAAGTTGGCTGTACTAGAACTTGATGAAATGGAAAATTTGGAAGAACTAAGCAATGGTCCTCTTCCCTTTGACTTTCTGAAGAGTTTAGAGACGCTACTCATCAATGACTGTAATGGTTTGGGAAGCATATTGTTAAAGAGCAAGCTAAACCTCTACAATCTTAAGACCATCAAATTGTGGCATTGCCCGAAATTGGTAACCCTATTTCAACTGCTGACTTCACAAAGTCTACTGCGATTGGAGGAATTAGAAATAATGGGCTGTGAGCAACTGGTAAACATAATAGCAGATGAAAGAACAGGGGAGAACTTGGGAGATGAAATAGTTGGTGTTGATAATGGTAATAAAAGAAGAAACAGTCACGCCCCAATGTTTTCAAATTTGAAAACTCTTTATATCTCATACTGTCCCCTCTTGGAATTTATAATTCCGGTCCTTTCTGCTCGAGACATTCCTGCACTGGAATCTATCACTATAGAATATTGTGATGAGCTGAAATACATATTTGGCAAATACCAACATGAAAATGAAGAGCTGGATTTGCATCAAGAGGTAAAGGATGTCGTACTTACTTCACTGGACAAAATGGAGCTCACTGGCTTGCCAAATTTCATTGACATTTTTCCAGAATGTTATCATCCCAAGCGTTCATCCCCGAAGAGGTCATCTTCCAAGTCACAAATGCAATCAGACCCCATGAAATGCAATATCTTCCCTTGGACTCATAAATATAGACACAAACTGAGGAGTACCACAAGTGCTCAAATTCCATTGGTTTCCAAGGATCAACTGCAACACAGCTCAATCTCATCGGCATCAAATCACCTTTGGGAACGTGCTGAATGTCTTTCAAAACAACCACAGATGTTGCGCAATATTAAAGAGATTGATCTCTGGGATCTTTCAAAGATAGAATCTGTGTTTATCATGTCTAATGCCCCAACAATGATGTTGGAAACTTTGACAATTGAGTATTGTGATAATTTGAAGCACATAATAATAGACACCGGAGATGACCGTGGTGGCAATAATTGGGGCGATGTGTTTCCGAAATTGGAAAAAATCTTGGTGAAACGTTGTGAGCTATTGGAATCTGTATTTGGACACTATCCTCATGATCATCAAAACCAAAGTGAGATTCACCTTCAGCTTCCAGCTTTGAAATTTCTCAACTTTTTCAAGCTGCCAAATTTAATCGGCATTTGTTCTAAAAACTACTCCACATCGTTGCCACTTCTGACTGAGTTTACACTCGGCGAATGCTCCCAGTTTAGCATTAAATCATTTGGTGATTTGTCCGTTCATGATTCAAGAGAATTGGGTAGCACAACCATCAAGGATTTGAGTGGAAACGTGCGATCTTTTCTCACTTTGGAAAAACCCAAGATATACAACTCCAAAGAAATAAATGAACAACAAATGCAGTTACGATTACAAAAATTTCAGTTGGGTGATCAGCCTCAGATGACCTATATTTTTGTGGGTCCCAAAAATTCTTGTACCCTCCAAAACCTTGAAGAGTTAACAATTGCGCGATGTGAAAAATTGGAAGTAATCTTTTCTGCTGCTATTTTAAGATACCTACCACAATTGCATAAACTAATCATAACAGAATGCAAAGAATTAAAGCAAATCATTGAAAAGGATGTGGAATATCACAAAATGTCCAATTTTCTCTCTTCAAAGATAGGCTTCCCAAAGCTAACAATACTTGTGGTAAATAAATGCGACAAACTGAAATGCATCTTCCCTGTCTCCACATCTAAAGAGTTTCCCAAGCTAGAGAATGTGATAATAAAAGAAGCATATGAGCTAGAGCAAGTATTCGAATACGAACAAAGTGATCAGAAAGTTGAGCTTCCAAATCTGAAATTTGCAGTATTTGTCAAACTTCCAAGCCTCTACCAGAGGATTGAATTCGAGACTGCAATAAGTCTTTTCATACAGAGTTGTCCAAAACTCTCTTTGACTTCAACAACAACTATCGACAAGGTTCAAAGGCTTACTAGATATGTTATCAAAGAATTTGGCGATTGGTTTCTCAAGCGCGTGGCAGAAGACATGGTTGATGAACTTGATGAAGAAGATTCTAATAATAAAGATACCATCAATCAAAATCCAATTGCAGAAATCACTGAAGAAGTTTCAGTTGGGCCTGATGTTCAAGCAGCATCCGGGTGTGAGTTGATTTGTTCACATGTCGATACTGATCAACAAGAAGATGACATTGAATCGAATGAGTTCCTTTTTGTGGAGACAAAAAGCAAACAATCACTTGAGGAAGAACAAGAATTTGTTGAGAAAGTTCCTGGTTTAGAGATTCCAACAATAACAATATCACCAACGGATTCAGAAGTAATTAGAAGGCCATGTCCAAGTCCATTGGATATCCCTCTACATGAATCACATTCACATGAGTTGGTGGATGAACAAAACATGGTAGAACCATGTTTGATGAACCAACAACACCTACTTGGAGAAACTGACATTACCTTTAAATCTCTTCAGGGAAATAATTTTCTCAAAGAAACGGAGGATCAAGCCATTCAAAAGGATTCTACATCAGAGAAAACTGTAAAAGAAACTCTGTCCACTGATTCAGAAACAAGAAGCACATCACTAGGACCATTACTTCCTCCTCAAGAGAAGAGTATTAAGAGAAGTGTTGAAGGAGCTACATCAGCGAATTCTATGACACCAACATCTTCAACTCATTCAGAATCAGTTAGTTCATTACCAGGAACATTAGTTACTTCTGAGCATAAAACACATTCGCCGGTAAGCTTATTGTATGCAAATGAGCATTCAAATATGTTCCTCTGCTTAAACCTAATGCTGCCATGTTTCCAAATCATTAATTGCACCAAGGGATTGGATTTAAAAGAATCCATGTTTGAAACAACTTTGATGGAAGAAGAAGAATTGAGGTGTTGA 5253 0.3794 MADIPNELAKKGLEKLMDWAIGEARYICCFTSIVADCEKEKEILEAKVKAVGQRVDQLKRSSQDTPADVTSWDKRADKLIQEDTKTKKTCFFGWCPNCIWRYNRGKELANKTEDARRINQELENLNITGLTPHLLGVEYHSSQDYISFKSRELIYNELLDALTDDNYITGLQGMGGTGKTTLARKVGQELEQSKQFDHVIDTTVSYTPDIRKIQDDIAVPLGLASELKDKSESERCKLLRSRLTNGEKILLILDDVWENTVEHIKFEKIGIPKSDDHKGCRVLLTTRDLNACRSLGCEKIIELQLLPEDEAWTLFEKHAHISSSTPKSLMDKGHEIVKECKGLPVAIAIIASRLKGEQRQVQWNAALISLQKPMHGVNKDLNEIYKCLWYSYDNMNNEEAKRLFLLCSVFPEDEELPTEVLTRFGIGAGLFGEVYDKYDDVRIQVAVAKNELIDSCLLLKAEGGRVKMHDLVREVALLKVNKEIRAVNLSGKHKKSLVESEKGMKYLLLEGNEHDVFSYRFDGSELEILKINCMVEEDSMEMPNSFFENMAKLRVLYLSCQHWGRPLSLLQSIESLTNIRSLFLERLRLGDISILGKLRSLEALDLVYCEVVELPREIAELERLRLLNLDGCEIEMDTTFDVIERCSSLEELYFTKFKVDSSSIHKKITLPALQRYHIRDGYDDETYDSVSKYVCASYIDTYFSEATFKYLVQTTEILKLTGIEGEWRNLIPEIVPIDDGMNYLVKLRLESWSKLQCLIDTSHINFSEQNFFSKLAVLELDEMENLEELSNGPLPFDFLKSLETLLINDCNGLGSILLKSKLNLYNLKTIKLWHCPKLVTLFQLLTSQSLLRLEELEIMGCEQLVNIIADERTGENLGDEIVGVDNGNKRRNSHAPMFSNLKTLYISYCPLLEFIIPVLSARDIPALESITIEYCDELKYIFGKYQHENEELDLHQEVKDVVLTSLDKMELTGLPNFIDIFPECYHPKRSSPKRSSSKSQMQSDPMKCNIFPWTHKYRHKLRSTTSAQIPLVSKDQLQHSSISSASNHLWERAECLSKQPQMLRNIKEIDLWDLSKIESVFIMSNAPTMMLETLTIEYCDNLKHIIIDTGDDRGGNNWGDVFPKLEKILVKRCELLESVFGHYPHDHQNQSEIHLQLPALKFLNFFKLPNLIGICSKNYSTSLPLLTEFTLGECSQFSIKSFGDLSVHDSRELGSTTIKDLSGNVRSFLTLEKPKIYNSKEINEQQMQLRLQKFQLGDQPQMTYIFVGPKNSCTLQNLEELTIARCEKLEVIFSAAILRYLPQLHKLIITECKELKQIIEKDVEYHKMSNFLSSKIGFPKLTILVVNKCDKLKCIFPVSTSKEFPKLENVIIKEAYELEQVFEYEQSDQKVELPNLKFAVFVKLPSLYQRIEFETAISLFIQSCPKLSLTSTTTIDKVQRLTRYVIKEFGDWFLKRVAEDMVDELDEEDSNNKDTINQNPIAEITEEVSVGPDVQAASGCELICSHVDTDQQEDDIESNEFLFVETKSKQSLEEEQEFVEKVPGLEIPTITISPTDSEVIRRPCPSPLDIPLHESHSHELVDEQNMVEPCLMNQQHLLGETDITFKSLQGNNFLKETEDQAIQKDSTSEKTVKETLSTDSETRSTSLGPLLPPQEKSIKRSVEGATSANSMTPTSSTHSESVSSLPGTLVTSEHKTHSPVSLLYANEHSNMFLCLNLMLPCFQIINCTKGLDLKESMFETTLMEEEELRC 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi140g00003 1750 Gene3D - 139 302 IPR027417 -
Gabi140g00003 1750 Gene3D Ribonuclease Inhibitor 823 958 IPR032675 -
Gabi140g00003 1750 Gene3D Ribonuclease Inhibitor 1150 1397 IPR032675 -
Gabi140g00003 1750 SUPERFAMILY RNI-like 543 940 - -
Gabi140g00003 1750 MobiDBLite consensus disorder prediction 1660 1692 - -
Gabi140g00003 1750 FunFam Probable disease resistance protein At1g61300 138 299 - -
Gabi140g00003 1750 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1120 1402 - -
Gabi140g00003 1750 Gene3D - 306 391 IPR042197 -
Gabi140g00003 1750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 407 IPR027417 -
Gabi140g00003 1750 Coils Coil 108 128 - -
Gabi140g00003 1750 Coils Coil 34 61 - -
Gabi140g00003 1750 MobiDBLite consensus disorder prediction 1619 1637 - -
Gabi140g00003 1750 SUPERFAMILY RNI-like 1269 1374 - -
Gabi140g00003 1750 Gene3D - 392 478 IPR036388 -
Gabi140g00003 1750 PRINTS Disease resistance protein signature 168 183 - -
Gabi140g00003 1750 PRINTS Disease resistance protein signature 596 612 - -
Gabi140g00003 1750 PRINTS Disease resistance protein signature 340 354 - -
Gabi140g00003 1750 PRINTS Disease resistance protein signature 243 257 - -
Gabi140g00003 1750 MobiDBLite consensus disorder prediction 1619 1692 - -
Gabi140g00003 1750 Gene3D Ribonuclease Inhibitor 481 790 IPR032675 -
Gabi140g00003 1750 Pfam NB-ARC domain 156 394 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi140g00003 Gabi-Chr140 122989 132559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi140g00003 146 632 WRKY Transcription Factor Family AT5G45050 25.408 2.96e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi140g00003 - - aprc:113851230 1704.49