Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1400g00001 ATGACGAGCTTTCAACTGAATTGTCAGAACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTTTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGATTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCTTCATCATCTGAAAGTTGCAATTCAGAATATCATGATGTTTGTGTGTGGATTGATGCACTTGCCAATGCAATTTCACATGTAAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGCAGTTCCAATTCATCAGCAAGGTTTATATAACATGAGGGCTAACCTCTGTAAAGCATTTTGA 669 0.4245 MTSFQLNCQNLTGLAGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLDFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAACHNFVAAPEPRLGRNRMDDGFLNEVSSLSSSSESCNSEYHDVCVWIDALANAISHVRISEPKRSKLWAVPIHQQGLYNMRANLCKAF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1400g00001 222 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1400g00001 222 SMART serkin_6 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1400g00001 222 SUPERFAMILY Protein kinase-like (PK-like) 9 149 IPR011009 -
Gabi1400g00001 222 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 137 - -
Gabi1400g00001 222 Gene3D Transferase(Phosphotransferase) domain 1 2 142 - -
Gabi1400g00001 222 Pfam Protein kinase domain 9 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1400g00001 Gabi-Chr1400 6823 8210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1400g00001 9 111 EF-hand Containing Proteins AT4G35310 51.456 1.08e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi1400g00001 Pkinase 5.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1400g00001 - - gmx:100809977 301.982