Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi137g00008 ATGATGGGGTTTGGGGATAATGCAATTCAGGCAGGGAGTTTGGATGTTGACAAGTCAAAGGGAAAGAAGAATGTAAATGGTGCAAAGAAGAAGAGAGGATGGCGCTTTAGATTCAGTTTCTTTGGTAGCTGCATACCTTCAAGGTCAAAAGTTGATAGCTCCATAAGTGGCACTACTACCCATAATGAGGAAAACAAATCTGCATTTGAAAAAAGCACAAAGGAAACAGTTGCTCCTCCAGAGTCCTCTACAACAATTAGTAATGTGGAAAGTATCCCTTCCACTCCAAAATTCAGTGAGGAGTTGAAGTTTGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGTTGGCAACTAGGAGTTTCAGACCAGAGTCTCTTCTTGGTGAGGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCAGGTACTGGGCTTACAGTTGCAGTCAAGATCCTCAACCAAAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACTATCTGGGTGATCTTGTCCATCCTAATCTTGTTAAATTGGTTGGTTTCTGCATTGAAGGTGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTCACAGGCCCATAATATATCGCGATTTCAAAACATCTAATATCCTATTAGATGCGGATTACAACGCAAAGCTTTCTGATTTTGGGCTTGCCAAAGATGCTCCTGAGGGGGAAAATACACATGTAACAACAAGAGTTATGGGAACATATGGCTATGCTGCTCCAGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACTGGCCGGAGAACCATTGATAAGAAAAGACCAAATGGGGAACACAATCTGGTGCAGTGGTTAAGACCTATACTTGGAGACAGAAGGATGTTATTCCAGATAATCGATCCGCGCCTTGAAGGTCACTTCTCAGTTAAAGGGGCACAGAAAGCTGCTCAGTTGGCTGCTCAATGCCTTAGCCGTAATCCAAAATCTAGACCTTTGATGAGTGAAGTTATTCAAGCTTTAAAGCCTTTGCCAAACCTTAAGGATATGGCTATCTCATCTTATCACTTCCAAATTGCACAAGTAGGTCGCACTATGTCCATGCCAAAGCCTAAAAATGGTATTAGAACACACTTAGTGTCTTTACCAAGAAAGGGTCAACCTGTAAGGACCTTGTCAAGTCCAAATGGTCAACATGCTTCTCCATATCCTCTTTATAGCAAGTCTCCAAAACCTATTGGGTAA 1431 0.4221 MMGFGDNAIQAGSLDVDKSKGKKNVNGAKKKRGWRFRFSFFGSCIPSRSKVDSSISGTTTHNEENKSAFEKSTKETVAPPESSTTISNVESIPSTPKFSEELKFASCLRKFTFNGLKLATRSFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNQNGHQGHKEWLAELNYLGDLVHPNLVKLVGFCIEGDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAHRPIIYRDFKTSNILLDADYNAKLSDFGLAKDAPEGENTHVTTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRTIDKKRPNGEHNLVQWLRPILGDRRMLFQIIDPRLEGHFSVKGAQKAAQLAAQCLSRNPKSRPLMSEVIQALKPLPNLKDMAISSYHFQIAQVGRTMSMPKPKNGIRTHLVSLPRKGQPVRTLSSPNGQHASPYPLYSKSPKPIG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi137g00008 476 Gene3D Phosphorylase Kinase; domain 1 107 208 - -
Gabi137g00008 476 ProSiteProfiles Protein kinase domain profile. 123 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi137g00008 476 MobiDBLite consensus disorder prediction 48 63 - -
Gabi137g00008 476 FunFam Probable serine/threonine-protein kinase PBL8 209 423 - -
Gabi137g00008 476 CDD STKc_IRAK 129 406 - -
Gabi137g00008 476 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Gabi137g00008 476 Gene3D Transferase(Phosphotransferase) domain 1 209 423 - -
Gabi137g00008 476 MobiDBLite consensus disorder prediction 76 90 - -
Gabi137g00008 476 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Gabi137g00008 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Gabi137g00008 476 Pfam Protein kinase domain 126 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi137g00008 476 MobiDBLite consensus disorder prediction 445 476 - -
Gabi137g00008 476 PANTHER OS01G0588500 PROTEIN-RELATED 72 406 - -
Gabi137g00008 476 MobiDBLite consensus disorder prediction 48 90 - -
Gabi137g00008 476 MobiDBLite consensus disorder prediction 449 465 - -
Gabi137g00008 476 SUPERFAMILY Protein kinase-like (PK-like) 97 403 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi137g00008 Gabi-Chr137 72679 76712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi137g00008 109 420 Glycoside Hydrolase AT3G07070 53.016 1.07e-111 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi137g00008 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi137g00008 - - gmx:100499647 812.372