Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi137g00007 ATGATGGGGTTTGGGGATAATGCAATTCAGGCAGGGAGTTTGGATGTTGACAAGTCAAAGGGAAAGAAGAATGTAAATGGTGCAAAGAAGAAGAGAGGATGGCGCTTTAGATTCAGTTTCTTTGGTAGCTGCATACCTTCAAGGTCAAAAGTTGATAGCTCCATAAGTGGCACTACTACCCATAATGAGGAAAACAAATCTGCATTTGAAAAAAGCACAAAGGAAACAGTTGCTCCTCCAGAGTCCTCTACAACAATTAGTAATGTGGAAAGTATCCCTTCCACTCCAAAATTCAGTGAGGAGTTGAAGTTTGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGTTGGCAACTAGGAGTTTCAGACCAGAGTCTCTTCTTGGTGAGGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCAGGTACTGGGCTTACAGTTGCAGTCAAGATCCTCAACCAAAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAACTATCTGGGTGATCTTGTCCATCCTAATCTTGTTAAATTGGTTGGTTTCTGCATTGAAGGTGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTCACAGGCCCATAATATATCGCGATTTCAAAACATCTAATATCCTATTAGATGCGGATTACAACGCAAAGCTTTCTGATTTTGGGCTTGCCAAAGATGCTCCTGAGGGGGAAAATACACATGTAACAACAAGAGTTATGGGAACATATGGCTATGCTGCTCCAGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACTGGCCGGAGAACCATTGATAAGAAAAGACCAAATGGGGAACACAATCTGGTGCAGTGGTTAAGACCTATACTTGGAGACAGAAGGATGTTATTCCAGATAATCGATCCGCGCCTTGAAGGTCACTTCTCAGTTAAAGGGGCACAGAAAGCTGCTCAGTTGGCTGCTCAATGCCTTAGCCGTAATCCAAAATCTAGACCTTTGATGAGTGAAGTTATTCAAGCTTTAAAGCCTTTGCCAAACCTTAAGGATATGGCTATCTCATCTTATCACTTCCAAATTGCACAAGTAGGTCGCACTATGTCCATGCCAAAGCCTAAAAATGGTATTAGAACACACTTAGTGTCTTTACCAAGAAAGGGTCAACCTGTAAGGACCTTGTCAAGTCCAAATGGTCAACATGCTTCTCCATATCCTCTTTATAGCAAGTCTCCAAAACCTATTGGGTAA 1434 0.4219 MMGFGDNAIQAGSLDVDKSKGKKNVNGAKKKRGWRFRFSFFGSCIPSRSKVDSSISGTTTHNEENKSAFEKSTKETVAPPESSTTISNVESIPSTPKFSEELKFASCLRKFTFNGLKLATRSFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKILNQNGHQGHKEWLAELNYLGDLVHPNLVKLVGFCIEGDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAHRPIIYRDFKTSNILLDADYNAKLSDFGLAKDAPEGENTHVTTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRTIDKKRPNGEHNLVQWLRPILGDRRMLFQIIDPRLEGHFSVKGAQKAAQLAAQCLSRNPKSRPLMSEVIQALKPLPNLKDMAISSYHFQIAQVGRTMSMPKPKNGIRTHLVSLPRKGQPVRTLSSPNGQHASPYPLYSKSPKPIG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi137g00007 477 MobiDBLite consensus disorder prediction 48 63 - -
Gabi137g00007 477 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Gabi137g00007 477 FunFam Probable serine/threonine-protein kinase PBL8 209 424 - -
Gabi137g00007 477 Gene3D Transferase(Phosphotransferase) domain 1 209 424 - -
Gabi137g00007 477 MobiDBLite consensus disorder prediction 450 466 - -
Gabi137g00007 477 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Gabi137g00007 477 Gene3D Phosphorylase Kinase; domain 1 107 208 - -
Gabi137g00007 477 MobiDBLite consensus disorder prediction 76 90 - -
Gabi137g00007 477 PANTHER OS01G0588500 PROTEIN-RELATED 72 407 - -
Gabi137g00007 477 CDD STKc_IRAK 129 407 - -
Gabi137g00007 477 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Gabi137g00007 477 MobiDBLite consensus disorder prediction 48 90 - -
Gabi137g00007 477 ProSiteProfiles Protein kinase domain profile. 123 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi137g00007 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Gabi137g00007 477 MobiDBLite consensus disorder prediction 446 477 - -
Gabi137g00007 477 Pfam Protein kinase domain 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi137g00007 Gabi-Chr137 72679 76712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi137g00007 109 421 Glycoside Hydrolase AT3G07070 53.333 1.00e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi137g00007 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi137g00007 - - gmx:100499647 806.594