Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1372g00021 ATGGATACAGCAACGGCTTTAATGGTGCTATCAGCAATAGCAGCCTATTTAATATGGTTCTCAATCATCACTCGTTCACTCAAAGGTCCACGTGTCTGGCCCCTATTGGGTAGCCTCCCGGGTCTCATCCAGCACGCTAATCGCATGCACGACTGGATCGCTGACAACCTCCGCGCGTGTGGAGGCACGTACCAAACCTGCATCTGCGCCATACCCTTCCTCGCCAGGAAAGAATGTCTCGTGACCGTCACGTGCGACCCCAAGAATCTCGAGCACATCCTCAAGCTGCGCTTTGACAATTACCCAAAAGGCCCCACGTGGCAGGCCGTGTTTCACGACTTGCTCGGCGAAGGAATCTTCAACTCGGACGGAGACACGTGGCTGTTCCAGCGTAAGACAGCCGCACTGGAATTCACCACACGAACCCTGCGCCAAGCCATGGCGCGCTGGGTGAGCCGAGCCATCAAGCACAGGTTCTGTCCAATCTTAGCCGCGGCTCAGGAAGACAATAAGCCAGTCGATCTCCAAGACCTCCTGCTTCGGCTCACTTTCGACAACATATGCGGCCTGGCTTTCGGTAAGGACCCACAGACTCTCGCCGTGGGTCTTCCCGAGAACGGCTTCGCCGTGTCTTTTGACCGCGCCACCGAAGCCACACTACAGCGCTTCATTTTGCCCGAAATCGTGTGGAAAGTAAAGAAGTGGCTTGGGCTTGGAATGGAAGTGAGCCTGTGCCAAAGCCTCGCACACATCGACCACTACCTCTCCAACATCATCAACGACCGAAAACTTGAATTGCAGAACAAACAACAGACTGGCAGTGGGGCCCTCCACGACGACTTGCTCTCACGATTCATGAAGAAAAAAGAATCCTACTCGGACGAGTTCCTCCAACACGTGGCACTCAACTTCATACTCGCTGGACGGGACACGTCATCAGTGGCGCTTAGCTGGTTCTTCTGGCTCTGCACCCAAAACCCTAGGGTGGAGGAAAAAATCCTGATCGAGCTCTGCACCGTTCTCAAGGAGACACGTGGCGATGATGTCTCCAAGTGGATGGAGGAGCCTCTGGTTTTCGAGGAGGTTGATCGCTTGGTGTACCTCAGGGCGGCGCTGTCGGAGACGCTTCGGCTTTACCCGTCGGTGCCGGAGGACTCCAAGCACGTGGTGAACGACGACGTTTTGCCAAGCGGGACTTTCGTTCCGGCGGGTTCGTCTGTGACGTATTCCATTTACTCGGTTGGGAGGATGAAGTTCATTTGGGGCGAGGACTGCCTTGAGTTCAAGCCGGAGCGGTGGCTCTCCGCCGACGGCGACAGGATTCAGCTGCAAGATTCTTACAAGTTTGTTGCGTTCAATGCGGGACCCAGGATTTGCTTGGGAAAGGACTTGGCCTATCTGCAGATGAAGTCCATCGCCGCCGCGGTGCTGCTGCGCCACCGCCTCACGGTGGCTCCTGGACACCGTGTGGAGCAGAAGATGTCGCTGACACTGTTCATGAAGTACGGGCTGAGGGTGAATGTGCACCCCAGGGATCTCAGGCCGGTGATGGAAAAGATAACAAACAAGGGTGACTCCTGCCGTAAAGAATCTCCAGTTATAATGGCATAA 1611 0.5531 MDTATALMVLSAIAAYLIWFSIITRSLKGPRVWPLLGSLPGLIQHANRMHDWIADNLRACGGTYQTCICAIPFLARKECLVTVTCDPKNLEHILKLRFDNYPKGPTWQAVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKHRFCPILAAAQEDNKPVDLQDLLLRLTFDNICGLAFGKDPQTLAVGLPENGFAVSFDRATEATLQRFILPEIVWKVKKWLGLGMEVSLCQSLAHIDHYLSNIINDRKLELQNKQQTGSGALHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVALSWFFWLCTQNPRVEEKILIELCTVLKETRGDDVSKWMEEPLVFEEVDRLVYLRAALSETLRLYPSVPEDSKHVVNDDVLPSGTFVPAGSSVTYSIYSVGRMKFIWGEDCLEFKPERWLSADGDRIQLQDSYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAPGHRVEQKMSLTLFMKYGLRVNVHPRDLRPVMEKITNKGDSCRKESPVIMA 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1372g00021 536 SUPERFAMILY Cytochrome P450 26 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 FunFam Cytochrome P450 21 514 - -
Gabi1372g00021 536 Pfam Cytochrome P450 28 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gabi1372g00021 536 PANTHER CYTOCHROME P450 21 505 - -
Gabi1372g00021 536 CDD CYP86A 67 504 - -
Gabi1372g00021 536 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1372g00021 536 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1372g00021 Gabi-Chr1372 206372 208912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1372g00021 1 523 Cytochrome P450 AT4G00360 75.573 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1372g00021 K15398 - gmx:121174913 938.332