Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1372g00007 ATGATAGTGGAGGCGGTGACAATAATGATAGCGATAACTGTGGGATTGTTTGATGTTGGGACTATGGGGATTCAGGCGTTGAATTCTATCACCAACTTTGCTTCTATGTCTTCTGATCACTATGCTTTTGACACTTATTTGCACACACATTCAAACTCAGGCATGGTCTCCTCTGATGGAGGTGGAGACCTTTCGTTTTTCTCTGACCCTTACTCTCTCTTCACTAGCTCTCCCACTCAAAAAAATAATAATTCAAACCCATTTGATGAAATTCTTCCTTCTTTTGATCCTTTTCCCCCATCTTTTTCATCTTTGTCTCCTCCAAATGCTCACTTGGAAAACCTTAGCCTTTATCTGACTAACAGTGTTCAGCCACAGTCAAATGGCCCAATTTCAACAAGTGAATTTGGAAGTTTCTCAGCTTGTGATGGGTGGGAAGTGAAAAATGAGGAATGCCAAATGGGTGTTGATTACACCTACAATCAGCAATTTCTTCCTCACAGTTACAGTGGCACTGAAAATATATATAAGTACATGCAGAGGAGCTTCAGCAGCAACTCTTTCGAAGGGAAACCTGATTTTCTGTTCCAACCTCACTGTGATACTCTCATCGATTCCCCAAAATTTCAAAGGCATGACACAAGCTCCCCTGAACACACTGTCTTCGCTGGACAAATGAGAAGGGTGTGCAGCACAGGAGATTTACAGAATATGCAAGCAAATCACATGTCTCAAACGGAGGGGCCGATGTTGGAGGAACCAAACTTCAAAGTAGGGCGTTACAGTGCCGAGGAAAAAAAAGAAAAAATTTCTAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAACAAGACCATTAAGTATGCATGCCGAAAGACACTGGCCGATAATCGACCGCGCATACGTGGCAGATTTGCCCGCAACGATGAAGCCAGCGAGATTCCCAAGGCTCCATGTTCACCCCGAGATGAAGGCGAATTCAATTTTTGGGTAAATTTTAATTCTATTGAAGAATTGCGGTTGCATGAAGAGCAAGACGATGTAACAGTGGGGGCAGGACACTACGTGAAAAGCCATGGAGTTAGTCAGTTTCAGTATTGTGGCTTTTGA 1110 0.4306 MIVEAVTIMIAITVGLFDVGTMGIQALNSITNFASMSSDHYAFDTYLHTHSNSGMVSSDGGGDLSFFSDPYSLFTSSPTQKNNNSNPFDEILPSFDPFPPSFSSLSPPNAHLENLSLYLTNSVQPQSNGPISTSEFGSFSACDGWEVKNEECQMGVDYTYNQQFLPHSYSGTENIYKYMQRSFSSNSFEGKPDFLFQPHCDTLIDSPKFQRHDTSSPEHTVFAGQMRRVCSTGDLQNMQANHMSQTEGPMLEEPNFKVGRYSAEEKKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASEIPKAPCSPRDEGEFNFWVNFNSIEELRLHEEQDDVTVGAGHYVKSHGVSQFQYCGF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1372g00007 369 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 82 317 IPR045281 GO:0009909
Gabi1372g00007 369 Pfam CCT motif 267 308 IPR010402 GO:0005515
Gabi1372g00007 369 ProSiteProfiles CCT domain profile. 266 308 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1372g00007 Gabi-Chr1372 78330 81737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1372g00007 262 313 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 5.82e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1372g00007 CCT 2.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1372g00007 - - gmx:102665661 410.609