Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi136g00007 ATGGGAGCCATCCGAGTCATCTCCACCAATAGAATTCAGGCACCGAGTCACAATAATGGTGACACAACTCAGATACTCAATTTAACACCATGGGATCTCCAGCTCCTCCACGTTGAAACCATCCAAAAAGGGCTTCTTTTTCACAATCCCAACAACACACAAGACACACAAATCCAAATCCAGAACCTCAAACACTCACTTTCCTCCACTCTTGCATTCTTTCCACTCCTCACAGGCCGTCTCATCATTACAGAACACAAAGATAACACTGCCTCCGCTTATATCGCGTGCAACAACGTTGGTGCACTTTTTGTCCATGCCACAGCAGAGAAAACCAGTGTTGCTGACATTCTTAAACCCAACTATGTTCCTCCCATTGTCCACTCCTTCTTTCAACTCAATGAAATGAAAAACAATGAGGGCACATCACAGCCATTGCTAGCAGTGCAAGTCACTGAGCTAGTTGACGGCATCTTCATGGCCTGCACAATCAATCACCTGGTAGCTGACGGCAAGTCGTTTTGGCATTTCATAAATTCTTGGGCTGAAATCTCACGTGGTTCCCATAATGTATCCAAACTCCCCCAACTTGATCGTTGCTTTAACAGTCCCATACGATTTCCTTTCACAAAGCAGGAAGAGAAGCAAAACCCTGAAAACTTCAAACGACAAGCACCACCGGTTCGGATATTCCATTTCACAAAGGAGAAAATAGCGCAACTCAAATCAAAAGCTAATGCAGAGGCCAGAACAGACAAAATATCTTCTCTGCAAGCGCTATTAACTCACCTTTGGCGCTTTGTGATCCGTTGCCAACGTCGTGACCCACAAGAAGAGATTCATTATGACGTGGTGATAAGCGCTAGAATAAGGATGGTTCCACCAATGCCAGAGGATTATTTTGGAAATGCATCGGTGGTTGGTCGTGTCACCATGAAAGCAGGGGAACTGCTTGAGGGTGGGCTCGCTAAGGGTGCTTGGGAAATAAACAAGATGATAGCTTCGTACTCTGAGGAGAAGGTGAAGAGCCAATGTGAGTCTTGGGTTAAAAACCCAAGGTTTATTGTTAGCGTGGGCAGTAGTAATCGCTTGATCACTGCAAGTTCCCCAAGGTTCAATGTTTATAGTAATGATTTTGGTTCGGGAATTCCTGTGGCAGTGAGAAGTGGTAGTGCAAATCAAAAATACGGGAATATTACTGTGATTGGTGGGGCAGAAAGAGGTAGTGTTGACATTGAAGCGTGCCTTCCTTATGAGATTTTGGAGGCAATGGGAAATGACCCTGAGTTCATGAATGCCACTTCCAAATTATAA 1314 0.4467 MGAIRVISTNRIQAPSHNNGDTTQILNLTPWDLQLLHVETIQKGLLFHNPNNTQDTQIQIQNLKHSLSSTLAFFPLLTGRLIITEHKDNTASAYIACNNVGALFVHATAEKTSVADILKPNYVPPIVHSFFQLNEMKNNEGTSQPLLAVQVTELVDGIFMACTINHLVADGKSFWHFINSWAEISRGSHNVSKLPQLDRCFNSPIRFPFTKQEEKQNPENFKRQAPPVRIFHFTKEKIAQLKSKANAEARTDKISSLQALLTHLWRFVIRCQRRDPQEEIHYDVVISARIRMVPPMPEDYFGNASVVGRVTMKAGELLEGGLAKGAWEINKMIASYSEEKVKSQCESWVKNPRFIVSVGSSNRLITASSPRFNVYSNDFGSGIPVAVRSGSANQKYGNITVIGGAERGSVDIEACLPYEILEAMGNDPEFMNATSKL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi136g00007 437 Gene3D - 3 217 IPR023213 -
Gabi136g00007 437 Pfam Transferase family 4 431 - -
Gabi136g00007 437 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 432 - -
Gabi136g00007 437 Gene3D - 223 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi136g00007 Gabi-Chr136 120374 121687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi136g00007 23 416 Monolignol Biosynthesis Gene Families AT5G48930 26.077 7.22e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi136g00007 - - gmx:100797643 536.954