Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1363g00011 ATGGTGTCAAGGTCGTATTCAAATTTACTGGAGCTGGCCTCTGGTGAGTCTCCATCATTTGGGAACATGAACAGGCGAATTCCGCGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCTGACAAGAGTGTGTGCTCTGATCCCTCTTCTTCATCGGCCCAACGAGAAAGGATCATAATAGTGGGGAATCAGCTCCCTATAAGGGCTCAGAGGAAGCTAGATGGTAACAGGAATTGGTTTTTCAGTTGGGATGAAAATTCACTTCTGCTCCAACTCAAAGATGGATTTGGGGATGATGATATTGAGGTCATTTATGTTGGATGCCTTAAGGAAGAAGTGCATCCAAATGAGCAAGATGAGGTTTCACAGATACTACTTGAGTCCTTTAAATGTGTCCCAACTTTTCTCCCACCTGATCTGTTTACCAGGTACTATCATGGCTTTTGCAAGCAACAGTTATGGCCACTGTTTCATTACATGTTACCTCTGTCACCGGGCCTTGGTGGCAGGTTTAATAGGTCACTGTGGCAAGCTTATGTCTCAGTGAATAAGATATTTGCAGATAGGATTATGGAAGTCATTAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCCTGAGGAAGAGATTTAACCGAGTGAAACTTGGATTCTTCCTCCATAGCCCATTCCCTTCATCGGAAATATACAAGACATTGCCTATTAGGGAAGAGCTCTTGAGAGCCCTCTTGAATTCGGATTTGATTGGCTTCCACACTTTTGATTATGCAAGGCATTTTCTCTCCTGTTGTAGTAGGATGCTTGGTCTTACATATGAATCCAAACGGGGTTATATTGGGCTTGAGTATTATGGTAGAACCATTAGTATCAAAATTCTTCCCGTTGGCATAGACATGGGTCAGCTTCAATCAGTTCTAGACCTGCCAAAGACTGAAGAAAAAGTTTCTGAGCTCATTAGACAGTTTTCTGATCAAGGCAAGACAATGTTACTTGGGGTGGATGACATGGATATTTTTAAGGGCATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGAATGTCTGGGAAAGGTTGTATTGGTCCAGATAGCTAATCCTGCCAGGGGACGAGGGAAAGACGTGAAGGAAGTGCAAACTGAGATGAAAGCAACCGTAAAACGGATTAATGAAACATTTGGGAAGCCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTAAGCTTTTATGAGAGAGTTGCCTACTATGTTGTTGCTGAGTGTTGTCTAGTGACTGCAGTCAGGGATGGAATGAATCTCATACCATATGAATATATAATCAGTCGTCAAGGCAATGAAAAATTGGATAAAGTATTGGGACTAGCTTCCTCCCCAAAGAAAAGCATGTTAGTTGTCTCTGAGTTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCAGCCCTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAGAAGCATTACAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGAATTGGTTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAACGGACGACGACTAGAGCTATCCTTCTAGATTATGATGATACACTGATGCCACAGGCTTCCATTGATAAGAGCCCATCCAGTAATTCTATTAAAATGCTTAATAGTTTGTGTAGAGATAAGAACAATACGGTATTTCTTGTCAGTGCCAGAAGCCGAAAGACACTTGCTGAATGGTTTTCTCCTTGTGAAAATCTGGGAATTGCTGCTGAGCATGGTTACTTTTTAAGACTGAAGGGAGATGCAGAATGGGAAACATGTGGACCTGCAATAGACTGTAGTTGGAAACAAATTGCAGAGCCTGTAATGAGGCTGTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACAGTACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTAATCATCTTGAAAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAATATTGTGGAGGTTAAACCACAGGGCGTGAGCAAGGGGCTTGTGGCCGAACGCCTACTTTCCACCATGCAAGGAAAGGAAATTTCACCTGATTTTGTTTTGTGTATAGGAGATGACCGGTCTGATGAAGATATGTTTGAGGTAATCACTAGTTCTATATCTGGTCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACTGTTGGTCAAAAGCCCAGTAAGGCTAAGTACTATCTGGATGATACTACTGAAATAGTGAGATTGGTGCAGGGTTTAGCCTGTGTTTCAGAGCAAACAGTTTTATTTTAG 2562 0.4258 MVSRSYSNLLELASGESPSFGNMNRRIPRIMTVAGLISDVDDDPDKSVCSDPSSSSAQRERIIIVGNQLPIRAQRKLDGNRNWFFSWDENSLLLQLKDGFGDDDIEVIYVGCLKEEVHPNEQDEVSQILLESFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTISIKILPVGIDMGQLQSVLDLPKTEEKVSELIRQFSDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPECLGKVVLVQIANPARGRGKDVKEVQTEMKATVKRINETFGKPGYDPVILIEEPLSFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDDTLMPQASIDKSPSSNSIKMLNSLCRDKNNTVFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKGDAEWETCGPAIDCSWKQIAEPVMRLYTETTDGSTIEDKETVLVWCYEDADPDFGSCQAKELLNHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAERLLSTMQGKEISPDFVLCIGDDRSDEDMFEVITSSISGPSMAPRAEVFACTVGQKPSKAKYYLDDTTEIVRLVQGLACVSEQTVLF 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1363g00011 853 Gene3D - 728 851 IPR023214 -
Gabi1363g00011 853 Gene3D - 595 727 IPR023214 -
Gabi1363g00011 853 SUPERFAMILY HAD-like 596 843 IPR036412 -
Gabi1363g00011 853 CDD GT20_TPS 61 549 IPR001830 GO:0003824|GO:0005992
Gabi1363g00011 853 NCBIfam trehalose-phosphatase 596 843 IPR003337 GO:0003824|GO:0005992
Gabi1363g00011 853 Gene3D Glycogen Phosphorylase B; 53 315 - -
Gabi1363g00011 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 315 - -
Gabi1363g00011 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 552 - -
Gabi1363g00011 853 FunFam Trehalose-6-phosphate synthase 2 679 758 - -
Gabi1363g00011 853 Pfam Trehalose-phosphatase 599 833 IPR003337 GO:0003824|GO:0005992
Gabi1363g00011 853 FunFam Alpha,alpha-trehalose-phosphate synthase 317 533 - -
Gabi1363g00011 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 844 IPR001830 GO:0003824|GO:0005992
Gabi1363g00011 853 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 725 852 - -
Gabi1363g00011 853 Pfam Glycosyltransferase family 20 61 549 IPR001830 GO:0003824|GO:0005992
Gabi1363g00011 853 CDD HAD_TPP 597 838 - -
Gabi1363g00011 853 NCBIfam HAD-IIB family hydrolase 598 800 IPR006379 -
Gabi1363g00011 853 Gene3D Glycogen Phosphorylase B; 316 533 - -
Gabi1363g00011 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 595 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1363g00011 Gabi-Chr1363 86406 90520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1363g00011 1 849 Trehalose Biosynthesis Gene Families AT1G68020 81.692 0.0 1469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1363g00011 K16055 - cit:102609352 1533.85